RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 MSH6P52701 1360 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 KIAA0232Q92628 1395 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 NFAT5O94916 1531 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 U2AF1L5P0DN76 240 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 PRKCSHP14314 528 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 ATF3P18847 181 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 RRP1P56182 461 aaKnown RBP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 GNAI1P63096 354 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 U2AF1Q01081 240 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 NFE2L2Q16236 605 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 PROSER2Q86WR7 435 aaPredicted RBP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 IP6K1Q92551 441 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 ARHGAP45Q92619 1136 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 CFAP44Q96MT7 982 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 IFT57Q9NWB7 429 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC00393-201ENST00000443621 CAMTA1Q9Y6Y1 1673 aa3.67□□□□□ -1.82
LINC00393-201ENST00000443621 CPDO75976 1380 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 IBTKQ9P2D0 1353 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-201ENST00000443621 KDM4FA0A1W2PPD8 638 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 IPO8O15397 1037 aaKnown RBP3.66□□□□□ -1.82
LINC00393-201ENST00000443621 ZNF853P0CG23 659 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 FKBP8Q14318 412 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 NME9Q86XW9 330 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC00393-201ENST00000443621 ABTB2Q8N961 1025 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 GAS2L2Q8NHY3 880 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 TRIM35Q9UPQ4 493 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 KIF16BQ96L93 1317 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 STRCP1A6NGW2 1772 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 LTN1O94822 1766 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 DLG5Q8TDM6 1919 aa3.66□□□□□ -1.82
LINC00393-201ENST00000443621 XIRP1Q702N8 1843 aaKnown RBP3.65□□□□□ -1.82
LINC00393-201ENST00000443621 LMO7Q8WWI1 1683 aa3.65□□□□□ -1.82
LINC00393-201ENST00000443621 TMEM94Q12767 1356 aa3.65□□□□□ -1.82
LINC00393-201ENST00000443621 PEAK1Q9H792 1746 aa3.65□□□□□ -1.82
LINC00393-201ENST00000443621 CRYBG1Q9Y4K1 1723 aa3.65□□□□□ -1.82
LINC00393-201ENST00000443621 HOXB7P09629 217 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 HOXC9P31274 260 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 RIPK4P57078 832 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 NLRP6P59044 892 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 EIF4A2Q14240 407 aaKnown RBP3.65□□□□□ -1.83
LINC00393-201ENST00000443621 AMOTQ4VCS5 1084 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 ARHGEF25Q86VW2 580 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 NHSL1Q5SYE7 1610 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 SOS2Q07890 1332 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-201ENST00000443621 MAP3K19Q56UN5 1328 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 NCKAP5LQ9HCH0 1330 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 ADAMTS7Q9UKP4 1686 aa3.65□□□□□ -1.83
LINC00393-201ENST00000443621 TNS3Q68CZ2 1445 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 LRRC37A3O60309 1634 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 CHL1O00533 1208 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 U2SURPO15042 1029 aaKnown RBP3.64□□□□□ -1.83
LINC00393-201ENST00000443621 EIF5BO60841 1220 aaKnown RBP3.64□□□□□ -1.83
LINC00393-201ENST00000443621 GCP02774 474 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 PRKAR2BP31323 418 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 AMPHP49418 695 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 RARSP54136 660 aaKnown RBP3.64□□□□□ -1.83
LINC00393-201ENST00000443621 ESCO1Q5FWF5 840 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 KRT28Q7Z3Y7 464 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 HOMEZQ8IX15 550 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 PMFBP1Q8TBY8 1022 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 CDCA7LQ96GN5 454 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 EMILIN1Q9Y6C2 1016 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 PXDNQ92626 1479 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 SPATA31A3Q5VYP0 1347 aa3.64□□□□□ -1.83
LINC00393-201ENST00000443621 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 COL18A1P39060 1754 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 COL22A1Q8NFW1 1626 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-201ENST00000443621 TCERG1O14776 1098 aaKnown RBP3.63□□□□□ -1.83
LINC00393-201ENST00000443621 HSP90AB1P08238 724 aaKnown RBP3.63□□□□□ -1.83
LINC00393-201ENST00000443621 TNNT2P45379 298 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-201ENST00000443621 HSP90AB2PQ58FF8 381 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 ZKSCAN2Q63HK3 967 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 CENPQQ7L2Z9 268 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-201ENST00000443621 C14orf37Q86TY3 774 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 CCDC146Q8IYE0 955 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 CCDC136Q96JN2 1154 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 SLAIN2Q9P270 581 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 TAOK2Q9UL54 1235 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 DDX19BQ9UMR2 479 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 PTPRCP08575 1304 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 FANCIQ9NVI1 1328 aa3.63□□□□□ -1.83
LINC00393-201ENST00000443621 AHDC1Q5TGY3 1603 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 PARP4Q9UKK3 1724 aaKnown RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 GNAT3A8MTJ3 354 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 FOXO3O43524 673 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 VAMP4O75379 141 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 RRS1Q15050 365 aaKnown RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 PLEKHO1Q53GL0 409 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 AKAP4Q5JQC9 854 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 SULT6B1Q6IMI4 303 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 ATF7IPQ6VMQ6 1270 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 IL27Q8NEV9 243 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 RTF1Q92541 710 aaKnown RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 EYA1Q99502 592 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 API5Q9BZZ5 524 aaKnown RBP3.62□□□□□ -1.83
LINC00393-201ENST00000443621 HDAC5Q9UQL6 1122 aa3.62□□□□□ -1.83
LINC00393-201ENST00000443621 CRB1P82279 1406 aa3.61□□□□□ -1.83
LINC00393-201ENST00000443621 PKD1L3Q7Z443 1732 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms