RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MCM4P33991 863 aa20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 BMP2KLQ5H9B9 411 aa20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 L1TD1Q5T7N2 865 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 LMOD3Q0VAK6 560 aa20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 NME9Q86XW9 330 aa20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 CDK12Q9NYV4 1490 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 ANKRD45Q5TZF3 282 aa20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 MBIPQ9NS73 344 aa20.68■□□□□ 0.9
SEMA3B-207ENST00000441915 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-207ENST00000441915 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
SEMA3B-207ENST00000441915 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
SEMA3B-207ENST00000441915 SETD1AO15047 1707 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-207ENST00000441915 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 COG3Q96JB2 828 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 AGLP35573 1532 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 SPATA31D1Q6ZQQ2 1576 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
SEMA3B-207ENST00000441915 C1orf115Q9H7X2 142 aa20.65■□□□□ 0.9
SEMA3B-207ENST00000441915 REREQ9P2R6 1566 aa20.65■□□□□ 0.9
SEMA3B-207ENST00000441915 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.9
SEMA3B-207ENST00000441915 ABCC4O15439 1325 aa20.64■□□□□ 0.9
SEMA3B-207ENST00000441915 SNX21Q969T3 373 aa20.64■□□□□ 0.89
SEMA3B-207ENST00000441915 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
SEMA3B-207ENST00000441915 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
SEMA3B-207ENST00000441915 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
SEMA3B-207ENST00000441915 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
SEMA3B-207ENST00000441915 RRS1Q15050 365 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-207ENST00000441915 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
SEMA3B-207ENST00000441915 API5Q9BZZ5 524 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-207ENST00000441915 FAM43AQ8N2R8 423 aa20.61■□□□□ 0.89
SEMA3B-207ENST00000441915 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
SEMA3B-207ENST00000441915 METP08581 1390 aa20.6■□□□□ 0.89
SEMA3B-207ENST00000441915 MLECQ14165 292 aa20.6■□□□□ 0.89
SEMA3B-207ENST00000441915 NCOA3Q9Y6Q9 1424 aa20.6■□□□□ 0.89
SEMA3B-207ENST00000441915 SIRT2Q8IXJ6 389 aa20.6■□□□□ 0.89
SEMA3B-207ENST00000441915 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
SEMA3B-207ENST00000441915 ZNF692Q9BU19 519 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-207ENST00000441915 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
SEMA3B-207ENST00000441915 GOLGA6L3A6NEY3 463 aa20.58■□□□□ 0.89
SEMA3B-207ENST00000441915 TRAK2O60296 914 aa20.58■□□□□ 0.89
SEMA3B-207ENST00000441915 NRXN3Q9Y4C0 1643 aa20.58■□□□□ 0.89
SEMA3B-207ENST00000441915 DDX11L8A8MPP1 907 aa20.58■□□□□ 0.88
SEMA3B-207ENST00000441915 NCKAP5LQ9HCH0 1330 aa20.58■□□□□ 0.88
SEMA3B-207ENST00000441915 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-207ENST00000441915 CPS1P31327 1500 aa20.57■□□□□ 0.88
SEMA3B-207ENST00000441915 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-207ENST00000441915 TBC1D9Q6ZT07 1266 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 SIRT1Q96EB6 747 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 MON2Q7Z3U7 1717 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 DDIT3P35638 169 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 DCTN1Q14203 1278 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
SEMA3B-207ENST00000441915 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
SEMA3B-207ENST00000441915 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
SEMA3B-207ENST00000441915 HAP1P54257 671 aaPredicted RBP20.55■□□□□ 0.88
SEMA3B-207ENST00000441915 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
SEMA3B-207ENST00000441915 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
SEMA3B-207ENST00000441915 KIF2CQ99661 725 aa20.54■□□□□ 0.88
SEMA3B-207ENST00000441915 TECPR2O15040 1411 aa20.53■□□□□ 0.88
SEMA3B-207ENST00000441915 ARXQ96QS3 562 aa20.53■□□□□ 0.88
SEMA3B-207ENST00000441915 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
SEMA3B-207ENST00000441915 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
SEMA3B-207ENST00000441915 C3P01024 1663 aa20.53■□□□□ 0.88
SEMA3B-207ENST00000441915 CDC45O75419 566 aa20.52■□□□□ 0.88
SEMA3B-207ENST00000441915 KNDC1Q76NI1 1749 aa20.52■□□□□ 0.88
SEMA3B-207ENST00000441915 XRCC6P12956 609 aaKnown RBP eCLIP20.52■□□□□ 0.87
SEMA3B-207ENST00000441915 PKNOX2Q96KN3 472 aa20.52■□□□□ 0.87
SEMA3B-207ENST00000441915 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
SEMA3B-207ENST00000441915 ITSN1Q15811 1721 aa20.51■□□□□ 0.87
SEMA3B-207ENST00000441915 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
SEMA3B-207ENST00000441915 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
SEMA3B-207ENST00000441915 INTS3Q68E01 1043 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-207ENST00000441915 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-207ENST00000441915 TNPO1Q92973 898 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-207ENST00000441915 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
SEMA3B-207ENST00000441915 PRR36Q9H6K5 1346 aa20.49■□□□□ 0.87
SEMA3B-207ENST00000441915 K7ELQ4 463 aaPredicted RBP20.49■□□□□ 0.87
SEMA3B-207ENST00000441915 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
SEMA3B-207ENST00000441915 PLEKHM2Q8IWE5 1019 aa20.48■□□□□ 0.87
SEMA3B-207ENST00000441915 RAB3GAP1Q15042 981 aa20.48■□□□□ 0.87
SEMA3B-207ENST00000441915 GSPT1P15170 499 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-207ENST00000441915 CHL1O00533 1208 aa20.47■□□□□ 0.87
SEMA3B-207ENST00000441915 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-207ENST00000441915 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
SEMA3B-207ENST00000441915 RPAP2Q8IXW5 612 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-207ENST00000441915 TTC21BQ7Z4L5 1316 aa20.46■□□□□ 0.87
SEMA3B-207ENST00000441915 MRE11P49959 708 aa20.46■□□□□ 0.87
SEMA3B-207ENST00000441915 ANKRD44Q8N8A2 993 aa20.46■□□□□ 0.87
SEMA3B-207ENST00000441915 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-207ENST00000441915 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
SEMA3B-207ENST00000441915 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
SEMA3B-207ENST00000441915 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
SEMA3B-207ENST00000441915 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-207ENST00000441915 PTMSP20962 102 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms