RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 CT47B1P0C2W7 299 aaPredicted RBP31.22■■■□□ 2.59
PDPK1-204ENST00000441549 SOX12O15370 315 aa31.21■■■□□ 2.59
PDPK1-204ENST00000441549 HSPA2P54652 639 aa31.21■■■□□ 2.59
PDPK1-204ENST00000441549 DCCP43146 1447 aa31.2■■■□□ 2.59
PDPK1-204ENST00000441549 LMTK3Q96Q04 1460 aa31.2■■■□□ 2.58
PDPK1-204ENST00000441549 STRCP1A6NGW2 1772 aa31.19■■■□□ 2.58
PDPK1-204ENST00000441549 AMPHP49418 695 aa31.19■■■□□ 2.58
PDPK1-204ENST00000441549 KIF1AQ12756 1690 aa31.19■■■□□ 2.58
PDPK1-204ENST00000441549 C1orf167Q5SNV9 1468 aa31.19■■■□□ 2.58
PDPK1-204ENST00000441549 ARHGEF10O15013 1369 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 CRBNQ96SW2 442 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 FANCIQ9NVI1 1328 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 BCAR3O75815 825 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 CALD1Q05682 793 aaKnown RBP31.18■■■□□ 2.58
PDPK1-204ENST00000441549 LMOD3Q0VAK6 560 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 ORAI2Q96SN7 254 aa31.18■■■□□ 2.58
PDPK1-204ENST00000441549 TMEM94Q12767 1356 aa31.17■■■□□ 2.58
PDPK1-204ENST00000441549 SULT6B1Q6IMI4 303 aa31.16■■■□□ 2.58
PDPK1-204ENST00000441549 RARSP54136 660 aaKnown RBP31.15■■■□□ 2.58
PDPK1-204ENST00000441549 C20orf194Q5TEA3 1177 aa31.15■■■□□ 2.58
PDPK1-204ENST00000441549 NUTM2GQ5VZR2 741 aa31.15■■■□□ 2.58
PDPK1-204ENST00000441549 RTL1A6NKG5 1358 aa31.14■■■□□ 2.58
PDPK1-204ENST00000441549 ATF3P18847 181 aa31.12■■■□□ 2.57
PDPK1-204ENST00000441549 HOXC9P31274 260 aa31.11■■■□□ 2.57
PDPK1-204ENST00000441549 AEBP1Q8IUX7 1158 aa31.11■■■□□ 2.57
PDPK1-204ENST00000441549 KCNH5Q8NCM2 988 aa31.11■■■□□ 2.57
PDPK1-204ENST00000441549 TSR2Q969E8 191 aaKnown RBP31.11■■■□□ 2.57
PDPK1-204ENST00000441549 FOXO3O43524 673 aa31.1■■■□□ 2.57
PDPK1-204ENST00000441549 PDE3AQ14432 1141 aa31.1■■■□□ 2.57
PDPK1-204ENST00000441549 MST1RQ04912 1400 aa31.1■■■□□ 2.57
PDPK1-204ENST00000441549 TSHZ2Q9NRE2 1034 aa31.1■■■□□ 2.57
PDPK1-204ENST00000441549 STRCQ7RTU9 1775 aa31.09■■■□□ 2.57
PDPK1-204ENST00000441549 NFAT5O94916 1531 aa31.09■■■□□ 2.57
PDPK1-204ENST00000441549 KDRP35968 1356 aa31.09■■■□□ 2.57
PDPK1-204ENST00000441549 IGSF1Q8N6C5 1336 aa31.09■■■□□ 2.57
PDPK1-204ENST00000441549 DLG5Q8TDM6 1919 aa31.08■■■□□ 2.57
PDPK1-204ENST00000441549 EXOSC9Q06265 439 aaKnown RBP31.07■■■□□ 2.56
PDPK1-204ENST00000441549 TRPM3Q9HCF6 1732 aaPredicted RBP31.07■■■□□ 2.56
PDPK1-204ENST00000441549 CADPS2Q86UW7 1296 aa31.06■■■□□ 2.56
PDPK1-204ENST00000441549 IFT57Q9NWB7 429 aa31.06■■■□□ 2.56
PDPK1-204ENST00000441549 KRT28Q7Z3Y7 464 aa31.05■■■□□ 2.56
PDPK1-204ENST00000441549 GNAI1P63096 354 aa31.04■■■□□ 2.56
PDPK1-204ENST00000441549 EYA1Q99502 592 aa31.04■■■□□ 2.56
PDPK1-204ENST00000441549 SLIT3O75094 1523 aa31.03■■■□□ 2.56
PDPK1-204ENST00000441549 LTN1O94822 1766 aa31.03■■■□□ 2.56
PDPK1-204ENST00000441549 CANXP27824 592 aaKnown RBP31.03■■■□□ 2.56
PDPK1-204ENST00000441549 PHRF1Q9P1Y6 1649 aaKnown RBP31.03■■■□□ 2.56
PDPK1-204ENST00000441549 ZNF853P0CG23 659 aa31.02■■■□□ 2.56
PDPK1-204ENST00000441549 IP6K1Q92551 441 aa31.02■■■□□ 2.56
PDPK1-204ENST00000441549 MSH6P52701 1360 aa31.02■■■□□ 2.56
PDPK1-204ENST00000441549 ZNF428Q96B54 188 aa30.99■■■□□ 2.55
PDPK1-204ENST00000441549 USP19O94966 1318 aa30.99■■■□□ 2.55
PDPK1-204ENST00000441549 XPCQ01831 940 aaPredicted RBP30.98■■■□□ 2.55
PDPK1-204ENST00000441549 CFAP44Q96MT7 982 aa30.98■■■□□ 2.55
PDPK1-204ENST00000441549 THUMPD2Q9BTF0 503 aaKnown RBP30.98■■■□□ 2.55
PDPK1-204ENST00000441549 FRAT1Q92837 279 aaPredicted RBP30.97■■■□□ 2.55
PDPK1-204ENST00000441549 LAS1LQ9Y4W2 734 aaKnown RBP30.96■■■□□ 2.55
PDPK1-204ENST00000441549 GCP02774 474 aa30.95■■■□□ 2.55
PDPK1-204ENST00000441549 XIRP1Q702N8 1843 aaKnown RBP30.95■■■□□ 2.54
PDPK1-204ENST00000441549 FAM83GA6ND36 823 aa30.94■■■□□ 2.54
PDPK1-204ENST00000441549 ALDH1L2Q3SY69 923 aa30.94■■■□□ 2.54
PDPK1-204ENST00000441549 ALS2Q96Q42 1657 aa30.94■■■□□ 2.54
PDPK1-204ENST00000441549 GAS2L2Q8NHY3 880 aa30.93■■■□□ 2.54
PDPK1-204ENST00000441549 BCL2L13Q9BXK5 485 aa30.93■■■□□ 2.54
PDPK1-204ENST00000441549 MBIPQ9NS73 344 aa30.93■■■□□ 2.54
PDPK1-204ENST00000441549 SMC4Q9NTJ3 1288 aa30.93■■■□□ 2.54
PDPK1-204ENST00000441549 MS4A1P11836 297 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 AAMPQ13685 434 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 ZKSCAN2Q63HK3 967 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 ARHGEF25Q86VW2 580 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 SSH1Q8WYL5 1049 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 NPHP3Q7Z494 1330 aa30.92■■■□□ 2.54
PDPK1-204ENST00000441549 MTHFSDQ2M296 383 aaKnown RBP30.9■■■□□ 2.54
PDPK1-204ENST00000441549 DCTN1Q14203 1278 aa30.9■■■□□ 2.54
PDPK1-204ENST00000441549 LMOD2Q6P5Q4 547 aa30.9■■■□□ 2.54
PDPK1-204ENST00000441549 PANK1Q8TE04 598 aa30.89■■■□□ 2.54
PDPK1-204ENST00000441549 HTATSF1O43719 755 aaKnown RBP30.88■■■□□ 2.53
PDPK1-204ENST00000441549 BRPF1P55201 1214 aaPredicted RBP30.88■■■□□ 2.53
PDPK1-204ENST00000441549 LTV1Q96GA3 475 aaPredicted RBP30.88■■■□□ 2.53
PDPK1-204ENST00000441549 KIF16BQ96L93 1317 aa30.86■■■□□ 2.53
PDPK1-204ENST00000441549 VAMP4O75379 141 aa30.86■■■□□ 2.53
PDPK1-204ENST00000441549 COG6Q9Y2V7 657 aa30.86■■■□□ 2.53
PDPK1-204ENST00000441549 KDM2BQ8NHM5 1336 aa30.85■■■□□ 2.53
PDPK1-204ENST00000441549 ZNF335Q9H4Z2 1342 aaPredicted RBP30.85■■■□□ 2.53
PDPK1-204ENST00000441549 CHL1O00533 1208 aa30.84■■■□□ 2.53
PDPK1-204ENST00000441549 RTF1Q92541 710 aaKnown RBP30.84■■■□□ 2.53
PDPK1-204ENST00000441549 CRB1P82279 1406 aa30.84■■■□□ 2.53
PDPK1-204ENST00000441549 CENPQQ7L2Z9 268 aaPredicted RBP30.84■■■□□ 2.53
PDPK1-204ENST00000441549 MCM10Q7L590 875 aa30.84■■■□□ 2.53
PDPK1-204ENST00000441549 IPO8O15397 1037 aaKnown RBP30.83■■■□□ 2.53
PDPK1-204ENST00000441549 DZIP1LQ8IYY4 767 aaKnown RBP30.82■■■□□ 2.52
PDPK1-204ENST00000441549 PXDNQ92626 1479 aa30.82■■■□□ 2.52
PDPK1-204ENST00000441549 MED1Q15648 1581 aaPredicted RBP30.81■■■□□ 2.52
PDPK1-204ENST00000441549 RLBP1P12271 317 aa30.81■■■□□ 2.52
PDPK1-204ENST00000441549 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
PDPK1-204ENST00000441549 ATF7IPQ6VMQ6 1270 aa30.81■■■□□ 2.52
PDPK1-204ENST00000441549 CLUAP1Q96AJ1 413 aa30.81■■■□□ 2.52
PDPK1-204ENST00000441549 ZBTB7CA1YPR0 619 aa30.8■■■□□ 2.52
PDPK1-204ENST00000441549 TWISTNBQ3B726 338 aaPredicted RBP30.8■■■□□ 2.52
PDPK1-204ENST00000441549 NBPF6Q5VWK0 638 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms