RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
PFDN4-202ENST00000441080 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
PFDN4-202ENST00000441080 RGS20O76081 388 aa9.51□□□□□ -0.89
PFDN4-202ENST00000441080 MPNDQ8N594 471 aa9.51□□□□□ -0.89
PFDN4-202ENST00000441080 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
PFDN4-202ENST00000441080 CDK15Q96Q40 435 aa9.51□□□□□ -0.89
PFDN4-202ENST00000441080 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
PFDN4-202ENST00000441080 ESPNB1AK53 854 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 SKIP12755 728 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 RAB15P59190 212 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 RNF20Q5VTR2 975 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
PFDN4-202ENST00000441080 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
PFDN4-202ENST00000441080 ATP9BO43861 1147 aa9.49□□□□□ -0.89
PFDN4-202ENST00000441080 FSHRP23945 695 aa9.49□□□□□ -0.89
PFDN4-202ENST00000441080 PHTF2Q8N3S3 785 aa9.49□□□□□ -0.89
PFDN4-202ENST00000441080 GDF9O60383 454 aa9.48□□□□□ -0.89
PFDN4-202ENST00000441080 ADH1CP00326 375 aa9.48□□□□□ -0.89
PFDN4-202ENST00000441080 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
PFDN4-202ENST00000441080 INTS6LQ5JSJ4 861 aaKnown RBP9.48□□□□□ -0.89
PFDN4-202ENST00000441080 SNIP1Q8TAD8 396 aaKnown RBP9.48□□□□□ -0.89
PFDN4-202ENST00000441080 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
PFDN4-202ENST00000441080 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
PFDN4-202ENST00000441080 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
PFDN4-202ENST00000441080 GRM5P41594 1212 aa9.47□□□□□ -0.89
PFDN4-202ENST00000441080 CFAP70Q5T0N1 1121 aa9.47□□□□□ -0.89
PFDN4-202ENST00000441080 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
PFDN4-202ENST00000441080 PLPP7Q8NBV4 271 aa9.47□□□□□ -0.89
PFDN4-202ENST00000441080 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
PFDN4-202ENST00000441080 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
PFDN4-202ENST00000441080 RFX1P22670 979 aa9.46□□□□□ -0.9
PFDN4-202ENST00000441080 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
PFDN4-202ENST00000441080 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
PFDN4-202ENST00000441080 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
PFDN4-202ENST00000441080 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PRR20EP86478 221 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PRR20CP86479 221 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PRR20DP86480 221 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PRR20BP86481 221 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PRR20AP86496 221 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 NR5A1Q13285 461 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
PFDN4-202ENST00000441080 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
PFDN4-202ENST00000441080 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
PFDN4-202ENST00000441080 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
PFDN4-202ENST00000441080 ERVH48-1M5A8F1 160 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 NCOA4Q13772 614 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 CCDC116Q8IYX3 515 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
PFDN4-202ENST00000441080 J3QL48 77 aa9.42□□□□□ -0.9
PFDN4-202ENST00000441080 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
PFDN4-202ENST00000441080 NR3C2P08235 984 aa9.42□□□□□ -0.9
PFDN4-202ENST00000441080 NNTQ13423 1086 aa9.42□□□□□ -0.9
PFDN4-202ENST00000441080 EML3Q32P44 896 aa9.42□□□□□ -0.9
PFDN4-202ENST00000441080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
PFDN4-202ENST00000441080 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
PFDN4-202ENST00000441080 PBXIP1Q96AQ6 731 aa9.41□□□□□ -0.9
PFDN4-202ENST00000441080 CDCA7Q9BWT1 371 aaPredicted RBP9.41□□□□□ -0.9
PFDN4-202ENST00000441080 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
PFDN4-202ENST00000441080 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
PFDN4-202ENST00000441080 SMPD1P17405 629 aa9.39□□□□□ -0.91
PFDN4-202ENST00000441080 VRTNQ9H8Y1 702 aa9.39□□□□□ -0.91
PFDN4-202ENST00000441080 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
PFDN4-202ENST00000441080 PGPEP1Q9NXJ5 209 aa9.39□□□□□ -0.91
PFDN4-202ENST00000441080 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
PFDN4-202ENST00000441080 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
PFDN4-202ENST00000441080 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
PFDN4-202ENST00000441080 USP4Q13107 963 aa9.38□□□□□ -0.91
PFDN4-202ENST00000441080 ZNF784Q8NCA9 323 aaPredicted RBP9.38□□□□□ -0.91
PFDN4-202ENST00000441080 SIRT1Q96EB6 747 aa9.38□□□□□ -0.91
PFDN4-202ENST00000441080 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
PFDN4-202ENST00000441080 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
PFDN4-202ENST00000441080 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
PFDN4-202ENST00000441080 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
PFDN4-202ENST00000441080 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
PFDN4-202ENST00000441080 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
PFDN4-202ENST00000441080 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 SCTRP47872 440 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 ERVK-9P63128 1117 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
PFDN4-202ENST00000441080 MYT1Q01538 1121 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
PFDN4-202ENST00000441080 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
PFDN4-202ENST00000441080 FAM187AA6NFU0 413 aa9.34□□□□□ -0.91
PFDN4-202ENST00000441080 ZIC2O95409 532 aaPredicted RBP9.34□□□□□ -0.91
PFDN4-202ENST00000441080 RASA1P20936 1047 aa9.34□□□□□ -0.91
PFDN4-202ENST00000441080 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
PFDN4-202ENST00000441080 GTF2IP78347 998 aa9.34□□□□□ -0.91
PFDN4-202ENST00000441080 HPS1Q92902 700 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms