RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 TNPO1Q92973 898 aaKnown RBP24.76■■□□□ 1.55
FMR1-208ENST00000440235 TSPY26PQ9H489 355 aa24.76■■□□□ 1.55
FMR1-208ENST00000440235 WDR7Q9Y4E6 1490 aa24.76■■□□□ 1.55
FMR1-208ENST00000440235 NEUROD6Q96NK8 337 aa24.75■■□□□ 1.55
FMR1-208ENST00000440235 G3BP1Q13283 466 aaKnown RBP eCLIP24.75■■□□□ 1.55
FMR1-208ENST00000440235 TMPOP42166 694 aaKnown RBP24.75■■□□□ 1.55
FMR1-208ENST00000440235 FERMT3Q86UX7 667 aa24.74■■□□□ 1.55
FMR1-208ENST00000440235 SDF4Q9BRK5 362 aa24.74■■□□□ 1.55
FMR1-208ENST00000440235 CPLX1O14810 134 aa24.74■■□□□ 1.55
FMR1-208ENST00000440235 KIF3AQ9Y496 699 aa24.74■■□□□ 1.55
FMR1-208ENST00000440235 AAMPQ13685 434 aa24.73■■□□□ 1.55
FMR1-208ENST00000440235 PREX2Q70Z35 1606 aa24.73■■□□□ 1.55
FMR1-208ENST00000440235 ATP2B1P20020 1258 aa24.73■■□□□ 1.55
FMR1-208ENST00000440235 WDR63Q8IWG1 891 aa24.73■■□□□ 1.55
FMR1-208ENST00000440235 GCC1Q96CN9 775 aa24.73■■□□□ 1.55
FMR1-208ENST00000440235 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
FMR1-208ENST00000440235 MBD3O95983 291 aa24.72■■□□□ 1.55
FMR1-208ENST00000440235 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
FMR1-208ENST00000440235 HDAC5Q9UQL6 1122 aa24.72■■□□□ 1.55
FMR1-208ENST00000440235 COL17A1Q9UMD9 1497 aaPredicted RBP24.71■■□□□ 1.55
FMR1-208ENST00000440235 C1orf141Q5JVX7 400 aa24.71■■□□□ 1.55
FMR1-208ENST00000440235 PLA2R1Q13018 1463 aa24.71■■□□□ 1.55
FMR1-208ENST00000440235 XRCC6P12956 609 aaKnown RBP eCLIP24.71■■□□□ 1.55
FMR1-208ENST00000440235 RBM42Q9BTD8 480 aaKnown RBP24.71■■□□□ 1.55
FMR1-208ENST00000440235 TPM2P07951 284 aa24.7■■□□□ 1.55
FMR1-208ENST00000440235 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.55
FMR1-208ENST00000440235 TRIM27P14373 513 aa24.7■■□□□ 1.54
FMR1-208ENST00000440235 TPD52L1Q16890 204 aaPredicted RBP24.7■■□□□ 1.54
FMR1-208ENST00000440235 NOS1P29475 1434 aa24.7■■□□□ 1.54
FMR1-208ENST00000440235 CROCC2H7BZ55 1655 aa24.7■■□□□ 1.54
FMR1-208ENST00000440235 TSHZ3Q63HK5 1081 aa24.7■■□□□ 1.54
FMR1-208ENST00000440235 EID1Q9Y6B2 187 aa24.7■■□□□ 1.54
FMR1-208ENST00000440235 NLRP6P59044 892 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 C8orf34Q49A92 452 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 SIL1Q9H173 461 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 NEXNQ0ZGT2 675 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 MYO5CQ9NQX4 1742 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 ERC2O15083 957 aa24.69■■□□□ 1.54
FMR1-208ENST00000440235 LRPPRCP42704 1394 aaKnown RBP24.69■■□□□ 1.54
FMR1-208ENST00000440235 SKIDA1Q1XH10 827 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 TTLL5Q6EMB2 1281 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 GPRASP1Q5JY77 1395 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 TPM3P06753 285 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 CCDC73Q6ZRK6 1079 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 NOC3LQ8WTT2 800 aaKnown RBP24.68■■□□□ 1.54
FMR1-208ENST00000440235 FSD1Q9BTV5 496 aa24.68■■□□□ 1.54
FMR1-208ENST00000440235 ZSCAN30Q86W11 494 aa24.67■■□□□ 1.54
FMR1-208ENST00000440235 CLASRPQ8N2M8 674 aaKnown RBP24.67■■□□□ 1.54
FMR1-208ENST00000440235 RBM27Q9P2N5 1060 aaKnown RBP24.67■■□□□ 1.54
FMR1-208ENST00000440235 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
FMR1-208ENST00000440235 GOLGA6L1Q8N7Z2 621 aa24.67■■□□□ 1.54
FMR1-208ENST00000440235 F6X3S4 739 aa24.65■■□□□ 1.54
FMR1-208ENST00000440235 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
FMR1-208ENST00000440235 NSD3Q9BZ95 1437 aa24.65■■□□□ 1.54
FMR1-208ENST00000440235 CWC27Q6UX04 472 aaKnown RBP24.64■■□□□ 1.54
FMR1-208ENST00000440235 MCM10Q7L590 875 aa24.64■■□□□ 1.54
FMR1-208ENST00000440235 CHMP4AQ9BY43 222 aa24.64■■□□□ 1.54
FMR1-208ENST00000440235 KDM5DQ9BY66 1539 aa24.64■■□□□ 1.54
FMR1-208ENST00000440235 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.53
FMR1-208ENST00000440235 FILIP1Q7Z7B0 1213 aa24.64■■□□□ 1.53
FMR1-208ENST00000440235 DNAJC2Q99543 621 aaKnown RBP24.64■■□□□ 1.53
FMR1-208ENST00000440235 SPINK5Q9NQ38 1064 aaPredicted RBP24.64■■□□□ 1.53
FMR1-208ENST00000440235 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
FMR1-208ENST00000440235 FAM177A1Q8N128 213 aaPredicted RBP24.63■■□□□ 1.53
FMR1-208ENST00000440235 CDK19Q9BWU1 502 aa24.63■■□□□ 1.53
FMR1-208ENST00000440235 EIF2AK4Q9P2K8 1649 aaKnown RBP24.63■■□□□ 1.53
FMR1-208ENST00000440235 GNAI2P04899 355 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 CAMK4Q16566 473 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 RLBP1P12271 317 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 PDILTQ8N807 584 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 TBC1D32Q96NH3 1257 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 CDC42BPBQ9Y5S2 1711 aa24.62■■□□□ 1.53
FMR1-208ENST00000440235 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.62■■□□□ 1.53
FMR1-208ENST00000440235 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
FMR1-208ENST00000440235 RRP9O43818 475 aaKnown RBP24.61■■□□□ 1.53
FMR1-208ENST00000440235 WASHC4Q2M389 1173 aa24.61■■□□□ 1.53
FMR1-208ENST00000440235 IDI1Q13907 227 aa24.61■■□□□ 1.53
FMR1-208ENST00000440235 MNS1Q8NEH6 495 aa24.61■■□□□ 1.53
FMR1-208ENST00000440235 GNAI3P08754 354 aa24.6■■□□□ 1.53
FMR1-208ENST00000440235 PPFIA3O75145 1194 aa24.6■■□□□ 1.53
FMR1-208ENST00000440235 HDGFL1Q5TGJ6 251 aa24.6■■□□□ 1.53
FMR1-208ENST00000440235 CBX1P83916 185 aa24.59■■□□□ 1.53
FMR1-208ENST00000440235 CNTROBQ8N137 903 aa24.59■■□□□ 1.53
FMR1-208ENST00000440235 CCDC34Q96HJ3 373 aa24.59■■□□□ 1.53
FMR1-208ENST00000440235 USP25Q9UHP3 1055 aa24.59■■□□□ 1.53
FMR1-208ENST00000440235 SMC2O95347 1197 aa24.58■■□□□ 1.53
FMR1-208ENST00000440235 LRRCC1Q9C099 1032 aa24.58■■□□□ 1.53
FMR1-208ENST00000440235 CIZ1Q9ULV3 898 aaPredicted RBP24.57■■□□□ 1.52
FMR1-208ENST00000440235 ATP7AQ04656 1500 aa24.57■■□□□ 1.52
FMR1-208ENST00000440235 RPGRIP1LQ68CZ1 1315 aa24.57■■□□□ 1.52
FMR1-208ENST00000440235 LARP1BQ659C4 914 aaKnown RBP24.57■■□□□ 1.52
FMR1-208ENST00000440235 TBC1D9Q6ZT07 1266 aa24.57■■□□□ 1.52
FMR1-208ENST00000440235 ZMYND15Q9H091 742 aa24.57■■□□□ 1.52
FMR1-208ENST00000440235 C14orf93Q9H972 538 aaKnown RBP24.57■■□□□ 1.52
FMR1-208ENST00000440235 CARD14Q9BXL6 1004 aa24.56■■□□□ 1.52
FMR1-208ENST00000440235 SRGAP3O43295 1099 aa24.56■■□□□ 1.52
FMR1-208ENST00000440235 GTF2E1P29083 439 aaPredicted RBP24.56■■□□□ 1.52
FMR1-208ENST00000440235 SYNE3Q6ZMZ3 975 aa24.56■■□□□ 1.52
FMR1-208ENST00000440235 TTC5Q8N0Z6 440 aa24.56■■□□□ 1.52
FMR1-208ENST00000440235 ZNF830Q96NB3 372 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms