RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.28
CHEK1-204ENST00000438015 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.28
CHEK1-204ENST00000438015 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.28
CHEK1-204ENST00000438015 ZKSCAN5Q9Y2L8 839 aa13.27□□□□□ -0.28
CHEK1-204ENST00000438015 KIF3AQ9Y496 699 aa13.27□□□□□ -0.28
CHEK1-204ENST00000438015 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
CHEK1-204ENST00000438015 ERICH4A6NGS2 130 aa13.27□□□□□ -0.29
CHEK1-204ENST00000438015 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
CHEK1-204ENST00000438015 ADCY5O95622 1261 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 SNX21Q969T3 373 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 KIF14Q15058 1648 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 FAM135AQ9P2D6 1515 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 WAPLQ7Z5K2 1190 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 FMNL2Q96PY5 1086 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 MEIS3Q99687 375 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
CHEK1-204ENST00000438015 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
CHEK1-204ENST00000438015 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
CHEK1-204ENST00000438015 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
CHEK1-204ENST00000438015 TMEM63CQ9P1W3 806 aa13.26□□□□□ -0.29
CHEK1-204ENST00000438015 BECN2A8MW95 431 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 CKAP2LQ8IYA6 745 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 CDK19Q9BWU1 502 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 KDM4AO75164 1064 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 AMPHP49418 695 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 CCAR2Q8N163 923 aaKnown RBP13.25□□□□□ -0.29
CHEK1-204ENST00000438015 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
CHEK1-204ENST00000438015 GORABQ5T7V8 394 aa13.25□□□□□ -0.29
CHEK1-204ENST00000438015 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.294e-6■□□□□ 8.8
CHEK1-204ENST00000438015 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
CHEK1-204ENST00000438015 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
CHEK1-204ENST00000438015 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 RAPGEF3O95398 923 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
CHEK1-204ENST00000438015 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHEK1-204ENST00000438015 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
CHEK1-204ENST00000438015 V9GYY5 206 aaPredicted RBP13.24□□□□□ -0.29
CHEK1-204ENST00000438015 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
CHEK1-204ENST00000438015 TTC22Q5TAA0 569 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
CHEK1-204ENST00000438015 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 H3BQV1 296 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 NME9Q86XW9 330 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 LMBRD1Q9NUN5 540 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 WDR62O43379 1518 aa13.23□□□□□ -0.29
CHEK1-204ENST00000438015 CPA1P15085 419 aa13.22□□□□□ -0.29
CHEK1-204ENST00000438015 HMGN5P82970 282 aaKnown RBP13.22□□□□□ -0.29
CHEK1-204ENST00000438015 ATP6V1DQ9Y5K8 247 aa13.22□□□□□ -0.29
CHEK1-204ENST00000438015 FYB1O15117 783 aa13.22□□□□□ -0.29
CHEK1-204ENST00000438015 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-204ENST00000438015 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
CHEK1-204ENST00000438015 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
CHEK1-204ENST00000438015 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
CHEK1-204ENST00000438015 TNNT3P45378 269 aaPredicted RBP13.21□□□□□ -0.29
CHEK1-204ENST00000438015 USP48Q86UV5 1035 aa13.21□□□□□ -0.29
CHEK1-204ENST00000438015 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
CHEK1-204ENST00000438015 FCHSD2O94868 740 aa13.21□□□□□ -0.29
CHEK1-204ENST00000438015 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHEK1-204ENST00000438015 NOL7Q9UMY1 257 aaKnown RBP13.21□□□□□ -0.3
CHEK1-204ENST00000438015 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.3
CHEK1-204ENST00000438015 GPT2Q8TD30 523 aa13.21□□□□□ -0.3
CHEK1-204ENST00000438015 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.3
CHEK1-204ENST00000438015 ATP10BO94823 1461 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 A0A0G2JS52 829 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 VAMP4O75379 141 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 NOS1P29475 1434 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
CHEK1-204ENST00000438015 DYNC1I1O14576 645 aa13.2□□□□□ -0.3
CHEK1-204ENST00000438015 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-204ENST00000438015 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
CHEK1-204ENST00000438015 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
CHEK1-204ENST00000438015 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
CHEK1-204ENST00000438015 GNAI2P04899 355 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
CHEK1-204ENST00000438015 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
CHEK1-204ENST00000438015 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
CHEK1-204ENST00000438015 INSRP06213 1382 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms