RNA–Protein interactions for RNA: ENST00000435165.2

SGIP1-206, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SGIP1, Length 3,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-206ENST00000435165 GOLGA6DP0CG33 693 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 CC2D1BQ5T0F9 858 aaKnown RBP4.87□□□□□ -1.63
SGIP1-206ENST00000435165 ZNF280DQ6N043 979 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 RNF39Q9H2S5 420 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 GOLGA6AQ9NYA3 693 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 NCKAP5LQ9HCH0 1330 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 ADGRB3O60242 1522 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 SETD5Q9C0A6 1442 aa4.87□□□□□ -1.63
SGIP1-206ENST00000435165 PAX3P23760 479 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 ZFYVE27Q5T4F4 411 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 SMC5Q8IY18 1101 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 EFCAB6Q5THR3 1501 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 PTCH1Q13635 1447 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 ARHGAP35Q9NRY4 1499 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 CALRP27797 417 aaKnown RBP4.86□□□□□ -1.63
SGIP1-206ENST00000435165 CSPP1Q1MSJ5 1256 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 ANKRD23Q86SG2 305 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
SGIP1-206ENST00000435165 DUOX2Q9NRD8 1548 aa4.86□□□□□ -1.63
SGIP1-206ENST00000435165 CREB3O43889 395 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 HSP90AB3PQ58FF7 597 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 MAGEC2Q9UBF1 373 aaPredicted RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 NEXMIFQ5QGS0 1516 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 DHX16O60231 1041 aaKnown RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 FOSBP53539 338 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 MTA1Q13330 715 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 NBPF10Q6P3W6 841 aaKnown RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 GET4Q7L5D6 327 aaPredicted RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 MSL3Q8N5Y2 521 aaKnown RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 CXorf38Q8TB03 319 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 CDCA7Q9BWT1 371 aaPredicted RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 NOP58Q9Y2X3 529 aaKnown RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 ATAD2Q6PL18 1390 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 ERBINQ96RT1 1412 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 IQGAP3Q86VI3 1631 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 KIF4AO95239 1232 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 SLC4A2P04920 1241 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 HOXD11P31277 338 aaPredicted RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 HDAC1Q13547 482 aaPredicted RBP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 UPF1Q92900 1129 aaKnown RBP eCLIP4.85□□□□□ -1.63
SGIP1-206ENST00000435165 KLHL42Q9P2K6 505 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 RPGRIP1LQ68CZ1 1315 aa4.85□□□□□ -1.63
SGIP1-206ENST00000435165 ZMYND10O75800 440 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 LIG1P18858 919 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 RGL3Q3MIN7 710 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 CCDC181Q5TID7 509 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 ATL2Q8NHH9 583 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 MARF1Q9Y4F3 1742 aaKnown RBP4.84□□□□□ -1.63
SGIP1-206ENST00000435165 ANP32CO43423 234 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 HELBQ8NG08 1087 aaPredicted RBP4.84□□□□□ -1.63
SGIP1-206ENST00000435165 KCNV2Q8TDN2 545 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 PMM1Q92871 262 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 GPATCH3Q96I76 525 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 ZNF777Q9ULD5 760 aaPredicted RBP4.84□□□□□ -1.63
SGIP1-206ENST00000435165 CEP152O94986 1710 aa4.84□□□□□ -1.63
SGIP1-206ENST00000435165 FANCIQ9NVI1 1328 aa4.84□□□□□ -1.64
SGIP1-206ENST00000435165 FLIIQ13045 1269 aa4.84□□□□□ -1.64
SGIP1-206ENST00000435165 SREK1Q8WXA9 508 aaKnown RBP4.84□□□□□ -1.64
SGIP1-206ENST00000435165 FEZ2Q9UHY8 353 aaPredicted RBP4.84□□□□□ -1.64
SGIP1-206ENST00000435165 CROCC2H7BZ55 1655 aa4.84□□□□□ -1.64
SGIP1-206ENST00000435165 ERBB3P21860 1342 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 ARHGEF10LQ9HCE6 1279 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 PIK3C2BO00750 1634 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 PARNO95453 639 aaKnown RBP4.83□□□□□ -1.64
SGIP1-206ENST00000435165 KCNA6P17658 529 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 CEBPAP49715 358 aaPredicted RBP4.83□□□□□ -1.64
SGIP1-206ENST00000435165 ZKSCAN2Q63HK3 967 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 ZNF500O60304 480 aaPredicted RBP4.83□□□□□ -1.64
SGIP1-206ENST00000435165 NKX1-1Q15270 411 aaPredicted RBP4.83□□□□□ -1.64
SGIP1-206ENST00000435165 CCDC184Q52MB2 194 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 BORCS6Q96GS4 357 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 KDM4CQ9H3R0 1056 aa4.83□□□□□ -1.64
SGIP1-206ENST00000435165 XRN1Q8IZH2 1706 aaKnown RBP4.83□□□□□ -1.64
SGIP1-206ENST00000435165 RBM47A0AV96 593 aaKnown RBP4.82□□□□□ -1.64
SGIP1-206ENST00000435165 VGLL3A8MV65 326 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 VTI1AQ96AJ9 217 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 TRPM2O94759 1503 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 CCDC194A0A1B0GVG4 234 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 BDNFP23560 247 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 NBPF6Q5VWK0 638 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 NBPF5PQ86XG9 351 aaPredicted RBP4.82□□□□□ -1.64
SGIP1-206ENST00000435165 NGEFQ8N5V2 710 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 NBPF4Q96M43 638 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 RGPD3A6NKT7 1758 aaPredicted RBP4.82□□□□□ -1.64
SGIP1-206ENST00000435165 RGPD4Q7Z3J3 1758 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 SH3BP5O60239 455 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 PPP4CP60510 307 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 P3H3Q8IVL6 736 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 ZNF513Q8N8E2 541 aaPredicted RBP4.82□□□□□ -1.64
SGIP1-206ENST00000435165 BSDC1Q9NW68 430 aaPredicted RBP4.82□□□□□ -1.64
SGIP1-206ENST00000435165 SERPINA10Q9UK55 444 aa4.82□□□□□ -1.64
SGIP1-206ENST00000435165 HMGB1P1B2RPK0 211 aaPredicted RBP4.81□□□□□ -1.64
SGIP1-206ENST00000435165 KCNA1Q09470 495 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 WDR78Q5VTH9 848 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 PROM2Q8N271 834 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 METTL14Q9HCE5 456 aaKnown RBP4.81□□□□□ -1.64
SGIP1-206ENST00000435165 MSH6P52701 1360 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 PLEKHG1Q9ULL1 1385 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 GYS2P54840 703 aa4.81□□□□□ -1.64
SGIP1-206ENST00000435165 RBM46Q8TBY0 533 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms