RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CAVIN1Q6NZI2 390 aaKnown RBP13.05□□□□□ -0.32
SCAF4-203ENST00000434667 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-203ENST00000434667 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-203ENST00000434667 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 KANK1Q14678 1352 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 DDIT3P35638 169 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
SCAF4-203ENST00000434667 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
SCAF4-203ENST00000434667 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
SCAF4-203ENST00000434667 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-203ENST00000434667 DDX19BQ9UMR2 479 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 DTNBO60941 627 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 HMOX1P09601 288 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 RAB3GAP1Q15042 981 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 GGT6Q6P531 493 aa13.04□□□□□ -0.32
SCAF4-203ENST00000434667 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
SCAF4-203ENST00000434667 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
SCAF4-203ENST00000434667 OTUD7AQ8TE49 926 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-203ENST00000434667 NINLQ9Y2I6 1382 aa13.03□□□□□ -0.32
SCAF4-203ENST00000434667 NUCB1Q02818 461 aa13.03□□□□□ -0.32
SCAF4-203ENST00000434667 HDAC1Q13547 482 aaPredicted RBP13.02□□□□□ -0.32
SCAF4-203ENST00000434667 RNF214Q8ND24 703 aa13.02□□□□□ -0.32
SCAF4-203ENST00000434667 GBP4Q96PP9 640 aa13.02□□□□□ -0.32
SCAF4-203ENST00000434667 ARHGEF40Q8TER5 1519 aa13.02□□□□□ -0.33
SCAF4-203ENST00000434667 CD109Q6YHK3 1445 aa13.02□□□□□ -0.33
SCAF4-203ENST00000434667 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
SCAF4-203ENST00000434667 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
SCAF4-203ENST00000434667 PUS7Q96PZ0 661 aaKnown RBP13.01□□□□□ -0.33
SCAF4-203ENST00000434667 ALKQ9UM73 1620 aa13.01□□□□□ -0.33
SCAF4-203ENST00000434667 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
SCAF4-203ENST00000434667 MSNP26038 577 aaKnown RBP13.01□□□□□ -0.33
SCAF4-203ENST00000434667 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
SCAF4-203ENST00000434667 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
SCAF4-203ENST00000434667 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
SCAF4-203ENST00000434667 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
SCAF4-203ENST00000434667 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
SCAF4-203ENST00000434667 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
SCAF4-203ENST00000434667 UBR1Q8IWV7 1749 aa13□□□□□ -0.33
SCAF4-203ENST00000434667 CPS1P31327 1500 aa13□□□□□ -0.33
SCAF4-203ENST00000434667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
SCAF4-203ENST00000434667 SMARCA5O60264 1052 aaPredicted RBP13□□□□□ -0.33
SCAF4-203ENST00000434667 PLEKHG5O94827 1062 aa13□□□□□ -0.33
SCAF4-203ENST00000434667 TSC1Q92574 1164 aa13□□□□□ -0.33
SCAF4-203ENST00000434667 RBSNQ9H1K0 784 aa13□□□□□ -0.33
SCAF4-203ENST00000434667 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
SCAF4-203ENST00000434667 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
SCAF4-203ENST00000434667 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
SCAF4-203ENST00000434667 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-203ENST00000434667 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
SCAF4-203ENST00000434667 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
SCAF4-203ENST00000434667 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
SCAF4-203ENST00000434667 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
SCAF4-203ENST00000434667 FAM177BA6PVY3 158 aa12.98□□□□□ -0.33
SCAF4-203ENST00000434667 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
SCAF4-203ENST00000434667 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
SCAF4-203ENST00000434667 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
SCAF4-203ENST00000434667 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
SCAF4-203ENST00000434667 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
SCAF4-203ENST00000434667 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
SCAF4-203ENST00000434667 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
SCAF4-203ENST00000434667 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
SCAF4-203ENST00000434667 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
SCAF4-203ENST00000434667 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
SCAF4-203ENST00000434667 SNX21Q969T3 373 aa12.96□□□□□ -0.33
SCAF4-203ENST00000434667 CCDC27Q2M243 656 aa12.96□□□□□ -0.34
SCAF4-203ENST00000434667 ZSCAN23Q3MJ62 389 aa12.95□□□□□ -0.34
SCAF4-203ENST00000434667 ZSCAN30Q86W11 494 aa12.95□□□□□ -0.34
SCAF4-203ENST00000434667 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
SCAF4-203ENST00000434667 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
SCAF4-203ENST00000434667 SYCE3A1L190 88 aa12.95□□□□□ -0.34
SCAF4-203ENST00000434667 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
SCAF4-203ENST00000434667 BMP2KLQ5H9B9 411 aa12.94□□□□□ -0.34
SCAF4-203ENST00000434667 ZNF830Q96NB3 372 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-203ENST00000434667 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
SCAF4-203ENST00000434667 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
SCAF4-203ENST00000434667 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
SCAF4-203ENST00000434667 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
SCAF4-203ENST00000434667 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
SCAF4-203ENST00000434667 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
SCAF4-203ENST00000434667 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
SCAF4-203ENST00000434667 C17orf53Q8N3J3 647 aaPredicted RBP12.93□□□□□ -0.34
SCAF4-203ENST00000434667 FYB1O15117 783 aa12.93□□□□□ -0.34
SCAF4-203ENST00000434667 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
SCAF4-203ENST00000434667 ZMYM3Q14202 1370 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 AAMPQ13685 434 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 RPGRIP1LQ68CZ1 1315 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 TECPR2O15040 1411 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
SCAF4-203ENST00000434667 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
SCAF4-203ENST00000434667 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 UQCRHP07919 91 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms