RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-203ENST00000428552 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
CSTF1-203ENST00000428552 DDB1Q16531 1140 aa11.87□□□□□ -0.51
CSTF1-203ENST00000428552 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
CSTF1-203ENST00000428552 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
CSTF1-203ENST00000428552 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
CSTF1-203ENST00000428552 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
CSTF1-203ENST00000428552 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
CSTF1-203ENST00000428552 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
CSTF1-203ENST00000428552 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
CSTF1-203ENST00000428552 C1QTNF8P60827 252 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 SLC15A2Q16348 729 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 KIAA1210Q9ULL0 1709 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 USP6P35125 1406 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
CSTF1-203ENST00000428552 CHD4Q14839 1912 aa11.84□□□□□ -0.51
CSTF1-203ENST00000428552 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
CSTF1-203ENST00000428552 SENP3-EIF4A1A0A087X0R7 540 aa11.84□□□□□ -0.51
CSTF1-203ENST00000428552 MAP3K5Q99683 1374 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 TOM1L2Q6ZVM7 507 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
CSTF1-203ENST00000428552 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
CSTF1-203ENST00000428552 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
CSTF1-203ENST00000428552 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
CSTF1-203ENST00000428552 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
CSTF1-203ENST00000428552 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
CSTF1-203ENST00000428552 NLRP6P59044 892 aa11.81□□□□□ -0.52
CSTF1-203ENST00000428552 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
CSTF1-203ENST00000428552 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
CSTF1-203ENST00000428552 NFAT5O94916 1531 aa11.81□□□□□ -0.52
CSTF1-203ENST00000428552 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
CSTF1-203ENST00000428552 TNS2Q63HR2 1409 aa11.8□□□□□ -0.52
CSTF1-203ENST00000428552 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
CSTF1-203ENST00000428552 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
CSTF1-203ENST00000428552 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
CSTF1-203ENST00000428552 CABP1Q9NZU7 370 aa11.8□□□□□ -0.52
CSTF1-203ENST00000428552 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
CSTF1-203ENST00000428552 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
CSTF1-203ENST00000428552 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
CSTF1-203ENST00000428552 ZNF827Q17R98 1081 aa11.79□□□□□ -0.52
CSTF1-203ENST00000428552 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
CSTF1-203ENST00000428552 ARXQ96QS3 562 aa11.79□□□□□ -0.52
CSTF1-203ENST00000428552 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
CSTF1-203ENST00000428552 ABCC6O95255 1503 aa11.78□□□□□ -0.52
CSTF1-203ENST00000428552 CENPJQ9HC77 1338 aaPredicted RBP11.78□□□□□ -0.52
CSTF1-203ENST00000428552 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
CSTF1-203ENST00000428552 BTAF1O14981 1849 aa11.76□□□□□ -0.53
CSTF1-203ENST00000428552 EXOC5O00471 708 aa11.76□□□□□ -0.53
CSTF1-203ENST00000428552 TTC21BQ7Z4L5 1316 aa11.76□□□□□ -0.53
CSTF1-203ENST00000428552 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
CSTF1-203ENST00000428552 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
CSTF1-203ENST00000428552 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
CSTF1-203ENST00000428552 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
CSTF1-203ENST00000428552 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
CSTF1-203ENST00000428552 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
CSTF1-203ENST00000428552 USP54Q70EL1 1684 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 SOX12O15370 315 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-203ENST00000428552 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 KCNA4P22459 653 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 GPR162Q16538 588 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
CSTF1-203ENST00000428552 ERBB3P21860 1342 aa11.71□□□□□ -0.53
CSTF1-203ENST00000428552 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
CSTF1-203ENST00000428552 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
CSTF1-203ENST00000428552 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSTF1-203ENST00000428552 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
CSTF1-203ENST00000428552 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
CSTF1-203ENST00000428552 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
CSTF1-203ENST00000428552 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
CSTF1-203ENST00000428552 IL2RBP14784 551 aa11.68□□□□□ -0.54
CSTF1-203ENST00000428552 LTN1O94822 1766 aa11.68□□□□□ -0.54
CSTF1-203ENST00000428552 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
CSTF1-203ENST00000428552 NSD2O96028 1365 aa11.67□□□□□ -0.54
CSTF1-203ENST00000428552 LY75O60449 1722 aa11.67□□□□□ -0.54
CSTF1-203ENST00000428552 KCNQ4P56696 695 aa11.67□□□□□ -0.54
CSTF1-203ENST00000428552 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
CSTF1-203ENST00000428552 SLC27A3Q5K4L6 730 aa11.66□□□□□ -0.54
CSTF1-203ENST00000428552 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
CSTF1-203ENST00000428552 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
CSTF1-203ENST00000428552 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
CSTF1-203ENST00000428552 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
CSTF1-203ENST00000428552 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
CSTF1-203ENST00000428552 ATP10DQ9P241 1426 aa11.65□□□□□ -0.54
CSTF1-203ENST00000428552 ADCY9O60503 1353 aa11.65□□□□□ -0.55
CSTF1-203ENST00000428552 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
CSTF1-203ENST00000428552 POLD1P28340 1107 aa11.64□□□□□ -0.55
CSTF1-203ENST00000428552 NME9Q86XW9 330 aa11.64□□□□□ -0.55
CSTF1-203ENST00000428552 FAM208AQ9UK61 1670 aaKnown RBP11.64□□□□□ -0.55
CSTF1-203ENST00000428552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSTF1-203ENST00000428552 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
CSTF1-203ENST00000428552 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
CSTF1-203ENST00000428552 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
CSTF1-203ENST00000428552 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms