RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 ZFYVE16Q7Z3T8 1539 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
ATP2C1-204ENST00000428331 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 DDIT3P35638 169 aa13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 KIF1BO60333 1816 aa13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 ZNF445P59923 1031 aa13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 RBM10P98175 930 aaKnown RBP13.16□□□□□ -0.3
ATP2C1-204ENST00000428331 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 MCM2P49736 904 aa13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 TTC22Q5TAA0 569 aa13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
ATP2C1-204ENST00000428331 ERC2O15083 957 aa13.15□□□□□ -0.31
ATP2C1-204ENST00000428331 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
ATP2C1-204ENST00000428331 NEK4P51957 841 aa13.14□□□□□ -0.31
ATP2C1-204ENST00000428331 MCM5P33992 734 aa13.14□□□□□ -0.31
ATP2C1-204ENST00000428331 TERF1P54274 439 aa13.14□□□□□ -0.31
ATP2C1-204ENST00000428331 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
ATP2C1-204ENST00000428331 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
ATP2C1-204ENST00000428331 DCTPP1Q9H773 170 aa13.13□□□□□ -0.31
ATP2C1-204ENST00000428331 COG3Q96JB2 828 aa13.13□□□□□ -0.31
ATP2C1-204ENST00000428331 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
ATP2C1-204ENST00000428331 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 UQCRHP07919 91 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 KIF2CQ99661 725 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 USP26Q9BXU7 913 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 SYCE3A1L190 88 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-204ENST00000428331 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 ARID3AQ99856 593 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 LMBRD1Q9NUN5 540 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 UHRF1BP1LA0JNW5 1464 aa13.11□□□□□ -0.31
ATP2C1-204ENST00000428331 ARAP3Q8WWN8 1544 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 LRSAM1Q6UWE0 723 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 ZKSCAN5Q9Y2L8 839 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 IDI1Q13907 227 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 EFCAB6Q5THR3 1501 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 SDSP20132 328 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
ATP2C1-204ENST00000428331 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 ABCC4O15439 1325 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 NPATQ14207 1427 aa13.09□□□□□ -0.31
ATP2C1-204ENST00000428331 FOXD4L6Q3SYB3 417 aaPredicted RBP13.08□□□□□ -0.31
ATP2C1-204ENST00000428331 FOXD4L3Q6VB84 417 aaPredicted RBP13.08□□□□□ -0.31
ATP2C1-204ENST00000428331 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.31
ATP2C1-204ENST00000428331 STK31Q9BXU1 1019 aa13.08□□□□□ -0.31
ATP2C1-204ENST00000428331 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 GSPT1P15170 499 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATP2C1-204ENST00000428331 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 ZGPATQ8N5A5 531 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 SASS6Q6UVJ0 657 aa13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 SHPRHQ149N8 1683 aa13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-204ENST00000428331 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
ATP2C1-204ENST00000428331 FBLN1P23142 703 aa13.06□□□□□ -0.32
ATP2C1-204ENST00000428331 CFAP65Q6ZU64 1925 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-204ENST00000428331 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-204ENST00000428331 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
ATP2C1-204ENST00000428331 ATP6V1DQ9Y5K8 247 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
ATP2C1-204ENST00000428331 DEPDC5O75140 1603 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms