RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 GNL3LQ9NVN8 582 aaKnown RBP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 FANCIQ9NVI1 1328 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 RBM5P52756 815 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 RNF214Q8ND24 703 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 ATF7IPQ6VMQ6 1270 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 AACSQ86V21 672 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 SRGAP3O43295 1099 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 WDR63Q8IWG1 891 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 IL1RAPL2Q9NP60 686 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 SLC3A2P08195 630 aaKnown RBP9.49□□□□□ -0.89
CTNND1-207ENST00000426142 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 CCDC141Q6ZP82 1450 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 HIP1O00291 1037 aa9.49□□□□□ -0.89
CTNND1-207ENST00000426142 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.891e-7■■■□□ 16.3
CTNND1-207ENST00000426142 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
CTNND1-207ENST00000426142 PDILTQ8N807 584 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 NME9Q86XW9 330 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
CTNND1-207ENST00000426142 CCDC70Q6NSX1 233 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 EPS15P42566 896 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
CTNND1-207ENST00000426142 ADAMTS2O95450 1211 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 FCHSD2O94868 740 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 TMPOP42166 694 aaKnown RBP9.47□□□□□ -0.89
CTNND1-207ENST00000426142 IFT57Q9NWB7 429 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 KIF14Q15058 1648 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 NAIPQ13075 1403 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 FIBPO43427 364 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
CTNND1-207ENST00000426142 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
CTNND1-207ENST00000426142 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
CTNND1-207ENST00000426142 PTPN23Q9H3S7 1636 aa9.46□□□□□ -0.89
CTNND1-207ENST00000426142 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.89
CTNND1-207ENST00000426142 TNNT3P45378 269 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-207ENST00000426142 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.89
CTNND1-207ENST00000426142 ABCA10Q8WWZ4 1543 aa9.46□□□□□ -0.89
CTNND1-207ENST00000426142 TTLL5Q6EMB2 1281 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 CCAR1Q8IX12 1150 aaKnown RBP9.46□□□□□ -0.9
CTNND1-207ENST00000426142 FOXO3O43524 673 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 TMEM132AQ24JP5 1023 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-207ENST00000426142 CHD1LQ86WJ1 897 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 CDK5RAP3Q96JB5 506 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
CTNND1-207ENST00000426142 ADGRF5Q8IZF2 1346 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 TMEM57Q8N5G2 664 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 AMOTL2Q9Y2J4 779 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 RABEP1Q15276 862 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 DUSP27Q5VZP5 1158 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 RAI14Q9P0K7 980 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 KCNH5Q8NCM2 988 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 PIBF1Q8WXW3 757 aa9.45□□□□□ -0.9
CTNND1-207ENST00000426142 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 NAT10Q9H0A0 1025 aaKnown RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 ABCC5O15440 1437 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 STK38Q15208 465 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 KINO60870 393 aaKnown RBP9.44□□□□□ -0.9
CTNND1-207ENST00000426142 ZFYVE27Q5T4F4 411 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 GRIN2AQ12879 1464 aa9.44□□□□□ -0.9
CTNND1-207ENST00000426142 SMARCA5O60264 1052 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 OFD1O75665 1012 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 SMC2O95347 1197 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 KRT18P05783 430 aaKnown RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 IDH1O75874 414 aaKnown RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 STARD3NLO95772 234 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 TDO2P48775 406 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 MYD88Q99836 296 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 TRAK2O60296 914 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 LRP2BPQ9P2M1 347 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 CUL7Q14999 1698 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 NASPP49321 788 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 IDI1Q13907 227 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 FAM135AQ9P2D6 1515 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 IGHMBP2P38935 993 aaKnown RBP9.43□□□□□ -0.9
CTNND1-207ENST00000426142 ODF2Q5BJF6 829 aa9.43□□□□□ -0.9
CTNND1-207ENST00000426142 SLFN5Q08AF3 891 aa9.42□□□□□ -0.9
CTNND1-207ENST00000426142 TRIM5Q9C035 493 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms