RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
UBR4-207ENST00000425413 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
UBR4-207ENST00000425413 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
UBR4-207ENST00000425413 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
UBR4-207ENST00000425413 PTPRUQ92729 1446 aa14.72□□□□□ -0.05
UBR4-207ENST00000425413 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
UBR4-207ENST00000425413 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
UBR4-207ENST00000425413 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
UBR4-207ENST00000425413 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
UBR4-207ENST00000425413 TECPR2O15040 1411 aa14.71□□□□□ -0.05
UBR4-207ENST00000425413 PLEKHG1Q9ULL1 1385 aa14.71□□□□□ -0.05
UBR4-207ENST00000425413 KRT24Q2M2I5 525 aa14.71□□□□□ -0.05
UBR4-207ENST00000425413 C8orf58Q8NAV2 365 aa14.71□□□□□ -0.05
UBR4-207ENST00000425413 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
UBR4-207ENST00000425413 UBR1Q8IWV7 1749 aa14.7□□□□□ -0.06
UBR4-207ENST00000425413 MCM10Q7L590 875 aa14.7□□□□□ -0.06
UBR4-207ENST00000425413 CDC42BPGQ6DT37 1551 aa14.7□□□□□ -0.06
UBR4-207ENST00000425413 IPO8O15397 1037 aaKnown RBP14.7□□□□□ -0.06
UBR4-207ENST00000425413 VAMP4O75379 141 aa14.7□□□□□ -0.06
UBR4-207ENST00000425413 GNAI1P63096 354 aa14.7□□□□□ -0.06
UBR4-207ENST00000425413 KIF16BQ96L93 1317 aa14.69□□□□□ -0.06
UBR4-207ENST00000425413 C14orf37Q86TY3 774 aa14.69□□□□□ -0.06
UBR4-207ENST00000425413 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
UBR4-207ENST00000425413 AATKQ6ZMQ8 1374 aa14.68□□□□□ -0.06
UBR4-207ENST00000425413 THEMISQ8N1K5 641 aaPredicted RBP14.68□□□□□ -0.06
UBR4-207ENST00000425413 KCNA6P17658 529 aa14.68□□□□□ -0.06
UBR4-207ENST00000425413 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
UBR4-207ENST00000425413 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
UBR4-207ENST00000425413 PLEKHG3A1L390 1219 aa14.67□□□□□ -0.06
UBR4-207ENST00000425413 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
UBR4-207ENST00000425413 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
UBR4-207ENST00000425413 FOXO3O43524 673 aa14.67□□□□□ -0.06
UBR4-207ENST00000425413 CALD1Q05682 793 aaKnown RBP14.67□□□□□ -0.06
UBR4-207ENST00000425413 ZBTB40Q9NUA8 1239 aa14.67□□□□□ -0.06
UBR4-207ENST00000425413 AAMPQ13685 434 aa14.66□□□□□ -0.06
UBR4-207ENST00000425413 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
UBR4-207ENST00000425413 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
UBR4-207ENST00000425413 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
UBR4-207ENST00000425413 USP6P35125 1406 aa14.66□□□□□ -0.06
UBR4-207ENST00000425413 NLRP6P59044 892 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 CFAP44Q96MT7 982 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 TBX22Q9Y458 520 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 MAP3K19Q56UN5 1328 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 AMPHP49418 695 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 LNPKQ9C0E8 428 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 USP19O94966 1318 aa14.65□□□□□ -0.06
UBR4-207ENST00000425413 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
UBR4-207ENST00000425413 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
UBR4-207ENST00000425413 ZNF853P0CG23 659 aa14.64□□□□□ -0.07
UBR4-207ENST00000425413 HDAC1Q13547 482 aaPredicted RBP14.61□□□□□ -0.07
UBR4-207ENST00000425413 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
UBR4-207ENST00000425413 OVOS2A0A0J9YW53 1432 aa14.61□□□□□ -0.07
UBR4-207ENST00000425413 OVOS2Q6IE36 1432 aa14.61□□□□□ -0.07
UBR4-207ENST00000425413 KNDC1Q76NI1 1749 aa14.61□□□□□ -0.07
UBR4-207ENST00000425413 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
UBR4-207ENST00000425413 MON2Q7Z3U7 1717 aa14.61□□□□□ -0.07
UBR4-207ENST00000425413 C3P01024 1663 aa14.6□□□□□ -0.07
UBR4-207ENST00000425413 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
UBR4-207ENST00000425413 ZBTB7BO15156 539 aaPredicted RBP14.6□□□□□ -0.07
UBR4-207ENST00000425413 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
UBR4-207ENST00000425413 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
UBR4-207ENST00000425413 MTHFSDQ2M296 383 aaKnown RBP14.59□□□□□ -0.07
UBR4-207ENST00000425413 SPRYD3Q8NCJ5 442 aa14.59□□□□□ -0.07
UBR4-207ENST00000425413 EYA1Q99502 592 aa14.59□□□□□ -0.07
UBR4-207ENST00000425413 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
UBR4-207ENST00000425413 SMC5Q8IY18 1101 aa14.58□□□□□ -0.07
UBR4-207ENST00000425413 USHBP1Q8N6Y0 703 aa14.58□□□□□ -0.07
UBR4-207ENST00000425413 NECTIN2Q92692 538 aa14.58□□□□□ -0.08
UBR4-207ENST00000425413 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
UBR4-207ENST00000425413 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
UBR4-207ENST00000425413 AKAP12Q02952 1782 aa14.57□□□□□ -0.08
UBR4-207ENST00000425413 APBB1O00213 710 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
UBR4-207ENST00000425413 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 CHD1LQ86WJ1 897 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 ARHGAP23Q9P227 1491 aa14.56□□□□□ -0.08
UBR4-207ENST00000425413 CHL1O00533 1208 aa14.55□□□□□ -0.08
UBR4-207ENST00000425413 NUCB1Q02818 461 aa14.55□□□□□ -0.08
UBR4-207ENST00000425413 LMOD2Q6P5Q4 547 aa14.55□□□□□ -0.08
UBR4-207ENST00000425413 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
UBR4-207ENST00000425413 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
UBR4-207ENST00000425413 FLT4P35916 1363 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 USP31Q70CQ4 1352 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 SLIT1O75093 1534 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 DIP2AQ14689 1571 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
UBR4-207ENST00000425413 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 ABCC4O15439 1325 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 SSH2Q76I76 1423 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 FER1L4A9Z1Z3 1794 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
UBR4-207ENST00000425413 ANKLE2Q86XL3 938 aa14.53□□□□□ -0.08
UBR4-207ENST00000425413 F6X3S4 739 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms