RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TCP11L2Q8N4U5 519 aa15.65■□□□□ 0.1
SSBP3-206ENST00000420121 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
SSBP3-206ENST00000420121 ABCC6O95255 1503 aa15.64■□□□□ 0.09
SSBP3-206ENST00000420121 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
SSBP3-206ENST00000420121 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
SSBP3-206ENST00000420121 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
SSBP3-206ENST00000420121 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
SSBP3-206ENST00000420121 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
SSBP3-206ENST00000420121 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
SSBP3-206ENST00000420121 NME9Q86XW9 330 aa15.62■□□□□ 0.09
SSBP3-206ENST00000420121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
SSBP3-206ENST00000420121 KCNH5Q8NCM2 988 aa15.62■□□□□ 0.09
SSBP3-206ENST00000420121 OVOS2A0A0J9YW53 1432 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 OVOS2Q6IE36 1432 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 RREB1Q92766 1687 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 WDR17Q8IZU2 1322 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 USP47Q96K76 1375 aa15.61■□□□□ 0.09
SSBP3-206ENST00000420121 SOX12O15370 315 aa15.6■□□□□ 0.09
SSBP3-206ENST00000420121 BAG6P46379 1132 aa15.6■□□□□ 0.09
SSBP3-206ENST00000420121 EN1Q05925 392 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-206ENST00000420121 FAM196AQ6ZSG2 479 aa15.59■□□□□ 0.09
SSBP3-206ENST00000420121 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-206ENST00000420121 MYOM1P52179 1685 aa15.59■□□□□ 0.09
SSBP3-206ENST00000420121 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
SSBP3-206ENST00000420121 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
SSBP3-206ENST00000420121 NUP188Q5SRE5 1749 aa15.57■□□□□ 0.08
SSBP3-206ENST00000420121 TRIM37O94972 964 aa15.57■□□□□ 0.08
SSBP3-206ENST00000420121 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
SSBP3-206ENST00000420121 TOM1L2Q6ZVM7 507 aa15.57■□□□□ 0.08
SSBP3-206ENST00000420121 TERF2IPQ9NYB0 399 aa15.57■□□□□ 0.08
SSBP3-206ENST00000420121 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
SSBP3-206ENST00000420121 RGPD3A6NKT7 1758 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-206ENST00000420121 RGPD4Q7Z3J3 1758 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 LRP5O75197 1615 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 ANKRD36BQ8N2N9 1353 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 CAMKK2Q96RR4 588 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 CARD10Q9BWT7 1032 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 PCGF6Q9BYE7 350 aa15.55■□□□□ 0.08
SSBP3-206ENST00000420121 OVOS2A0A0G2JMS6 1433 aa15.54■□□□□ 0.08
SSBP3-206ENST00000420121 ERBB3P21860 1342 aa15.54■□□□□ 0.08
SSBP3-206ENST00000420121 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
SSBP3-206ENST00000420121 EZH2Q15910 746 aaKnown RBP15.54■□□□□ 0.08
SSBP3-206ENST00000420121 KIF20BQ96Q89 1820 aa15.54■□□□□ 0.08
SSBP3-206ENST00000420121 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
SSBP3-206ENST00000420121 FAM208AQ9UK61 1670 aaKnown RBP15.53■□□□□ 0.08
SSBP3-206ENST00000420121 TMF1P82094 1093 aa15.52■□□□□ 0.08
SSBP3-206ENST00000420121 DDB1Q16531 1140 aa15.52■□□□□ 0.08
SSBP3-206ENST00000420121 BCL9O00512 1426 aa15.51■□□□□ 0.07
SSBP3-206ENST00000420121 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
SSBP3-206ENST00000420121 APBA3O96018 575 aa15.51■□□□□ 0.07
SSBP3-206ENST00000420121 MARCH10Q8NA82 808 aaPredicted RBP15.51■□□□□ 0.07
SSBP3-206ENST00000420121 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
SSBP3-206ENST00000420121 PSDA5PKW4 1024 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-206ENST00000420121 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
SSBP3-206ENST00000420121 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-206ENST00000420121 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
SSBP3-206ENST00000420121 FBLN1P23142 703 aa15.49■□□□□ 0.07
SSBP3-206ENST00000420121 PTF1AQ7RTS3 328 aa15.49■□□□□ 0.07
SSBP3-206ENST00000420121 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
SSBP3-206ENST00000420121 NHSQ6T4R5 1651 aa15.48■□□□□ 0.07
SSBP3-206ENST00000420121 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
SSBP3-206ENST00000420121 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-206ENST00000420121 FYB1O15117 783 aa15.47■□□□□ 0.07
SSBP3-206ENST00000420121 ANKRD24Q8TF21 1146 aa15.47■□□□□ 0.07
SSBP3-206ENST00000420121 IP6K1Q92551 441 aa15.47■□□□□ 0.07
SSBP3-206ENST00000420121 SHANK3Q9BYB0 1731 aa15.47■□□□□ 0.07
SSBP3-206ENST00000420121 R3HDM1Q15032 1099 aaKnown RBP15.46■□□□□ 0.07
SSBP3-206ENST00000420121 COG3Q96JB2 828 aa15.46■□□□□ 0.07
SSBP3-206ENST00000420121 CARD14Q9BXL6 1004 aa15.45■□□□□ 0.06
SSBP3-206ENST00000420121 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
SSBP3-206ENST00000420121 ANKRD26Q9UPS8 1709 aa15.44■□□□□ 0.06
SSBP3-206ENST00000420121 EXOC5O00471 708 aa15.44■□□□□ 0.06
SSBP3-206ENST00000420121 HOXC9P31274 260 aa15.44■□□□□ 0.06
SSBP3-206ENST00000420121 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
SSBP3-206ENST00000420121 BTAF1O14981 1849 aa15.43■□□□□ 0.06
SSBP3-206ENST00000420121 PLSCR1O15162 318 aa15.43■□□□□ 0.06
SSBP3-206ENST00000420121 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
SSBP3-206ENST00000420121 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
SSBP3-206ENST00000420121 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
SSBP3-206ENST00000420121 IL2RBP14784 551 aa15.42■□□□□ 0.06
SSBP3-206ENST00000420121 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
SSBP3-206ENST00000420121 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
SSBP3-206ENST00000420121 PROM2Q8N271 834 aa15.41■□□□□ 0.06
SSBP3-206ENST00000420121 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
SSBP3-206ENST00000420121 MAP2P11137 1827 aaKnown RBP15.4■□□□□ 0.06
SSBP3-206ENST00000420121 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-206ENST00000420121 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-206ENST00000420121 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
SSBP3-206ENST00000420121 MEGF6O75095 1541 aa15.39■□□□□ 0.05
SSBP3-206ENST00000420121 KCNQ2O43526 872 aa15.39■□□□□ 0.05
SSBP3-206ENST00000420121 DOT1LQ8TEK3 1739 aa15.39■□□□□ 0.05
SSBP3-206ENST00000420121 AMPHP49418 695 aa15.38■□□□□ 0.05
SSBP3-206ENST00000420121 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-206ENST00000420121 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
SSBP3-206ENST00000420121 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
SSBP3-206ENST00000420121 NBPF6Q5VWK0 638 aa15.36■□□□□ 0.05
SSBP3-206ENST00000420121 NBPF4Q96M43 638 aa15.36■□□□□ 0.05
SSBP3-206ENST00000420121 INSRP06213 1382 aa15.36■□□□□ 0.05
SSBP3-206ENST00000420121 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms