RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 PTF1AQ7RTS3 328 aa22.36■■□□□ 1.17
PTPA-213ENST00000419582 CDCA7Q9BWT1 371 aaPredicted RBP22.36■■□□□ 1.17
PTPA-213ENST00000419582 STK32BQ9NY57 414 aa22.36■■□□□ 1.17
PTPA-213ENST00000419582 TXNRD1Q16881 649 aa22.35■■□□□ 1.17
PTPA-213ENST00000419582 CDK19Q9BWU1 502 aa22.34■■□□□ 1.17
PTPA-213ENST00000419582 BRD4O60885 1362 aaPredicted RBP22.34■■□□□ 1.17
PTPA-213ENST00000419582 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.17
PTPA-213ENST00000419582 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
PTPA-213ENST00000419582 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
PTPA-213ENST00000419582 ARXQ96QS3 562 aa22.31■■□□□ 1.16
PTPA-213ENST00000419582 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
PTPA-213ENST00000419582 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
PTPA-213ENST00000419582 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
PTPA-213ENST00000419582 TOM1L2Q6ZVM7 507 aa22.25■■□□□ 1.15
PTPA-213ENST00000419582 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
PTPA-213ENST00000419582 GPR162Q16538 588 aa22.22■■□□□ 1.15
PTPA-213ENST00000419582 CARD10Q9BWT7 1032 aa22.22■■□□□ 1.15
PTPA-213ENST00000419582 ARHGEF28Q8N1W1 1705 aaKnown RBP22.21■■□□□ 1.15
PTPA-213ENST00000419582 SLC16A10Q8TF71 515 aa22.21■■□□□ 1.15
PTPA-213ENST00000419582 EXOC5O00471 708 aa22.2■■□□□ 1.14
PTPA-213ENST00000419582 KDM2AQ9Y2K7 1162 aa22.2■■□□□ 1.14
PTPA-213ENST00000419582 AXIN2Q9Y2T1 843 aa22.2■■□□□ 1.14
PTPA-213ENST00000419582 SLIT3O75094 1523 aa22.2■■□□□ 1.14
PTPA-213ENST00000419582 NLRP6P59044 892 aa22.18■■□□□ 1.14
PTPA-213ENST00000419582 COL18A1P39060 1754 aa22.17■■□□□ 1.14
PTPA-213ENST00000419582 ARHGEF25Q86VW2 580 aa22.16■■□□□ 1.14
PTPA-213ENST00000419582 PAPPAQ13219 1627 aa22.14■■□□□ 1.14
PTPA-213ENST00000419582 AKAP12Q02952 1782 aa22.14■■□□□ 1.13
PTPA-213ENST00000419582 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.13
PTPA-213ENST00000419582 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
PTPA-213ENST00000419582 USP6P35125 1406 aa22.13■■□□□ 1.13
PTPA-213ENST00000419582 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
PTPA-213ENST00000419582 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
PTPA-213ENST00000419582 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
PTPA-213ENST00000419582 KCNH5Q8NCM2 988 aa22.11■■□□□ 1.13
PTPA-213ENST00000419582 CPSF1Q10570 1443 aaKnown RBP22.11■■□□□ 1.13
PTPA-213ENST00000419582 ZBTB7CA1YPR0 619 aa22.1■■□□□ 1.13
PTPA-213ENST00000419582 POLD1P28340 1107 aa22.1■■□□□ 1.13
PTPA-213ENST00000419582 COL24A1Q17RW2 1714 aa22.09■■□□□ 1.13
PTPA-213ENST00000419582 TNS2Q63HR2 1409 aa22.09■■□□□ 1.13
PTPA-213ENST00000419582 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
PTPA-213ENST00000419582 AKT1S1Q96B36 256 aa22.09■■□□□ 1.13
PTPA-213ENST00000419582 SRPK2P78362 688 aaKnown RBP22.08■■□□□ 1.13
PTPA-213ENST00000419582 LRRC4BQ9NT99 713 aa22.08■■□□□ 1.13
PTPA-213ENST00000419582 NHSQ6T4R5 1651 aa22.07■■□□□ 1.12
PTPA-213ENST00000419582 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
PTPA-213ENST00000419582 SLC27A3Q5K4L6 730 aa22.06■■□□□ 1.12
PTPA-213ENST00000419582 TRPM1Q7Z4N2 1603 aa22.06■■□□□ 1.12
PTPA-213ENST00000419582 HSPA6P17066 643 aa22.05■■□□□ 1.12
PTPA-213ENST00000419582 CSB-PGBD3P0DP91 1061 aa22.04■■□□□ 1.12
PTPA-213ENST00000419582 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
PTPA-213ENST00000419582 ABCC6O95255 1503 aa22.03■■□□□ 1.12
PTPA-213ENST00000419582 ZNF692Q9BU19 519 aaPredicted RBP22.03■■□□□ 1.12
PTPA-213ENST00000419582 NLGN2Q8NFZ4 835 aa22.02■■□□□ 1.12
PTPA-213ENST00000419582 ACSBG1Q96GR2 724 aa22.02■■□□□ 1.12
PTPA-213ENST00000419582 QSER1Q2KHR3 1735 aa22.02■■□□□ 1.12
PTPA-213ENST00000419582 YBX3P16989 372 aaKnown RBP eCLIP22.01■■□□□ 1.119e-8■□□□□ 11.1
PTPA-213ENST00000419582 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
PTPA-213ENST00000419582 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
PTPA-213ENST00000419582 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
PTPA-213ENST00000419582 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
PTPA-213ENST00000419582 PIK3C2AO00443 1686 aa22■■□□□ 1.11
PTPA-213ENST00000419582 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
PTPA-213ENST00000419582 ATP10DQ9P241 1426 aa21.98■■□□□ 1.11
PTPA-213ENST00000419582 TTC21AQ8NDW8 1320 aa21.98■■□□□ 1.11
PTPA-213ENST00000419582 IL2RBP14784 551 aa21.97■■□□□ 1.11
PTPA-213ENST00000419582 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
PTPA-213ENST00000419582 GPBP1L1Q9HC44 474 aaPredicted RBP21.97■■□□□ 1.11
PTPA-213ENST00000419582 NBPF1Q3BBV0 1214 aa21.96■■□□□ 1.11
PTPA-213ENST00000419582 BTAF1O14981 1849 aa21.96■■□□□ 1.11
PTPA-213ENST00000419582 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
PTPA-213ENST00000419582 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
PTPA-213ENST00000419582 ERBB3P21860 1342 aa21.95■■□□□ 1.1
PTPA-213ENST00000419582 ADCY9O60503 1353 aa21.95■■□□□ 1.1
PTPA-213ENST00000419582 NFAT5O94916 1531 aa21.95■■□□□ 1.1
PTPA-213ENST00000419582 RGPD5Q99666 1765 aa21.94■■□□□ 1.1
PTPA-213ENST00000419582 CD2APQ9Y5K6 639 aa21.91■■□□□ 1.1
PTPA-213ENST00000419582 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
PTPA-213ENST00000419582 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
PTPA-213ENST00000419582 EVC2Q86UK5 1308 aa21.89■■□□□ 1.1
PTPA-213ENST00000419582 USP31Q70CQ4 1352 aa21.87■■□□□ 1.09
PTPA-213ENST00000419582 SOX12O15370 315 aa21.86■■□□□ 1.09
PTPA-213ENST00000419582 HMGB2P26583 209 aaKnown RBP21.85■■□□□ 1.09
PTPA-213ENST00000419582 DNAJC5GQ8N7S2 189 aa21.85■■□□□ 1.09
PTPA-213ENST00000419582 COL23A1Q86Y22 540 aaPredicted RBP21.84■■□□□ 1.09
PTPA-213ENST00000419582 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.09
PTPA-213ENST00000419582 APLP1P51693 650 aa21.83■■□□□ 1.09
PTPA-213ENST00000419582 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
PTPA-213ENST00000419582 KIF3CO14782 793 aa21.82■■□□□ 1.08
PTPA-213ENST00000419582 ANKRD24Q8TF21 1146 aa21.82■■□□□ 1.08
PTPA-213ENST00000419582 PRIM1P49642 420 aaKnown RBP21.81■■□□□ 1.08
PTPA-213ENST00000419582 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
PTPA-213ENST00000419582 KTN1Q86UP2 1357 aaKnown RBP21.8■■□□□ 1.08
PTPA-213ENST00000419582 KCNQ4P56696 695 aa21.8■■□□□ 1.08
PTPA-213ENST00000419582 NSD2O96028 1365 aa21.79■■□□□ 1.08
PTPA-213ENST00000419582 FLAD1Q8NFF5 587 aa21.79■■□□□ 1.08
PTPA-213ENST00000419582 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
PTPA-213ENST00000419582 LY75O60449 1722 aa21.78■■□□□ 1.08
PTPA-213ENST00000419582 CCNL1Q9UK58 526 aaPredicted RBP21.78■■□□□ 1.08
PTPA-213ENST00000419582 USP54Q70EL1 1684 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms