RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 ANP32BQ92688 251 aaKnown RBP9.73□□□□□ -0.85
VRK2-203ENST00000417641 ZKSCAN5Q9Y2L8 839 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
VRK2-203ENST00000417641 PPLO60437 1756 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 GPT2Q8TD30 523 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 ZDHHC9Q9Y397 364 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
VRK2-203ENST00000417641 PKP1Q13835 747 aa9.72□□□□□ -0.85
VRK2-203ENST00000417641 CAVIN1Q6NZI2 390 aaKnown RBP9.72□□□□□ -0.85
VRK2-203ENST00000417641 YEATS2Q9ULM3 1422 aa9.72□□□□□ -0.85
VRK2-203ENST00000417641 ABCC4O15439 1325 aa9.72□□□□□ -0.85
VRK2-203ENST00000417641 USP26Q9BXU7 913 aa9.72□□□□□ -0.85
VRK2-203ENST00000417641 CDC42BPGQ6DT37 1551 aa9.71□□□□□ -0.85
VRK2-203ENST00000417641 EVC2Q86UK5 1308 aa9.71□□□□□ -0.85
VRK2-203ENST00000417641 VAMP4O75379 141 aa9.71□□□□□ -0.85
VRK2-203ENST00000417641 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.85
VRK2-203ENST00000417641 TMEM132EQ6IEE7 984 aa9.71□□□□□ -0.85
VRK2-203ENST00000417641 PLEKHM2Q8IWE5 1019 aa9.71□□□□□ -0.85
VRK2-203ENST00000417641 CWC22Q9HCG8 908 aaKnown RBP9.71□□□□□ -0.85
VRK2-203ENST00000417641 A0A1W2PP64 1363 aa9.71□□□□□ -0.86
VRK2-203ENST00000417641 UQCRHLA0A096LP55 91 aa9.71□□□□□ -0.86
VRK2-203ENST00000417641 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
VRK2-203ENST00000417641 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
VRK2-203ENST00000417641 UQCRHP07919 91 aa9.71□□□□□ -0.86
VRK2-203ENST00000417641 CHMP4BQ9H444 224 aaKnown RBP9.71□□□□□ -0.86
VRK2-203ENST00000417641 RPGRIP1LQ68CZ1 1315 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 LRSAM1Q6UWE0 723 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
VRK2-203ENST00000417641 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 GLI2P10070 1586 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
VRK2-203ENST00000417641 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 MTERF4Q7Z6M4 381 aaKnown RBP9.7□□□□□ -0.86
VRK2-203ENST00000417641 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 TMEM63CQ9P1W3 806 aa9.7□□□□□ -0.86
VRK2-203ENST00000417641 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
VRK2-203ENST00000417641 TTC22Q5TAA0 569 aa9.69□□□□□ -0.86
VRK2-203ENST00000417641 CD163L1Q9NR16 1453 aa9.69□□□□□ -0.86
VRK2-203ENST00000417641 FYB1O15117 783 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 SASS6Q6UVJ0 657 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 DCTPP1Q9H773 170 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
VRK2-203ENST00000417641 FAM135BQ49AJ0 1406 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
VRK2-203ENST00000417641 FCHSD2O94868 740 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 ZNF853P0CG23 659 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 ZGPATQ8N5A5 531 aaKnown RBP9.68□□□□□ -0.86
VRK2-203ENST00000417641 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 KNDC1Q76NI1 1749 aa9.68□□□□□ -0.86
VRK2-203ENST00000417641 NPATQ14207 1427 aa9.67□□□□□ -0.86
VRK2-203ENST00000417641 CHD1O14646 1710 aa9.67□□□□□ -0.86
VRK2-203ENST00000417641 LRRC7Q96NW7 1537 aa9.67□□□□□ -0.86
VRK2-203ENST00000417641 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
VRK2-203ENST00000417641 NCLP19338 710 aaKnown RBP9.67□□□□□ -0.86
VRK2-203ENST00000417641 TSPYL6Q8N831 410 aa9.67□□□□□ -0.86
VRK2-203ENST00000417641 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
VRK2-203ENST00000417641 CAMSAP1Q5T5Y3 1602 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 AK9Q5TCS8 1911 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
VRK2-203ENST00000417641 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 ZFYVE9O95405 1425 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.86
VRK2-203ENST00000417641 SYCE3A1L190 88 aa9.65□□□□□ -0.87
VRK2-203ENST00000417641 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.87
VRK2-203ENST00000417641 ATP10DQ9P241 1426 aa9.65□□□□□ -0.87
VRK2-203ENST00000417641 KCNA4P22459 653 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 IFT57Q9NWB7 429 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 BRD1O95696 1058 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 CHGAP10645 457 aaKnown RBP9.64□□□□□ -0.87
VRK2-203ENST00000417641 NFE2L2Q16236 605 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
VRK2-203ENST00000417641 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
VRK2-203ENST00000417641 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
VRK2-203ENST00000417641 ASXL2Q76L83 1435 aa9.64□□□□□ -0.87
VRK2-203ENST00000417641 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 ABCC3O15438 1527 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 MBD3O95983 291 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 SDSP20132 328 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 PRKAR2BP31323 418 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 CUL4AQ13619 759 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
VRK2-203ENST00000417641 MBIPQ9NS73 344 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 CLTCQ00610 1675 aaKnown RBP9.63□□□□□ -0.87
VRK2-203ENST00000417641 ST18O60284 1047 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 GTF2F1P35269 517 aaKnown RBP eCLIP9.63□□□□□ -0.87
VRK2-203ENST00000417641 GNAI1P63096 354 aa9.63□□□□□ -0.87
VRK2-203ENST00000417641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.63□□□□□ -0.87
VRK2-203ENST00000417641 RGS12O14924 1447 aa9.62□□□□□ -0.87
VRK2-203ENST00000417641 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms