RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
LINC00343-202ENST00000415294 CCDC125Q86Z20 511 aa11.66□□□□□ -0.54
LINC00343-202ENST00000415294 RNF135Q8IUD6 432 aa11.66□□□□□ -0.54
LINC00343-202ENST00000415294 CHIC2Q9UKJ5 165 aa11.66□□□□□ -0.54
LINC00343-202ENST00000415294 PIK3CDO00329 1044 aa11.65□□□□□ -0.54
LINC00343-202ENST00000415294 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
LINC00343-202ENST00000415294 DZIP3Q86Y13 1208 aaKnown RBP11.65□□□□□ -0.54
LINC00343-202ENST00000415294 PHTF2Q8N3S3 785 aa11.65□□□□□ -0.54
LINC00343-202ENST00000415294 GGCXP38435 758 aa11.64□□□□□ -0.55
LINC00343-202ENST00000415294 ZNF511Q8NB15 262 aa11.64□□□□□ -0.55
LINC00343-202ENST00000415294 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
LINC00343-202ENST00000415294 BRD1O95696 1058 aa11.63□□□□□ -0.55
LINC00343-202ENST00000415294 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
LINC00343-202ENST00000415294 BAP1Q92560 729 aa11.63□□□□□ -0.55
LINC00343-202ENST00000415294 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
LINC00343-202ENST00000415294 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
LINC00343-202ENST00000415294 FAM174AQ8TBP5 190 aa11.62□□□□□ -0.55
LINC00343-202ENST00000415294 FAM196BA6NMK8 535 aa11.61□□□□□ -0.55
LINC00343-202ENST00000415294 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
LINC00343-202ENST00000415294 AGERQ15109 404 aa11.61□□□□□ -0.55
LINC00343-202ENST00000415294 PLPP7Q8NBV4 271 aa11.61□□□□□ -0.55
LINC00343-202ENST00000415294 MAGEB6P1A0A0J9YX57 407 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 KCNA1Q09470 495 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-202ENST00000415294 EML3Q32P44 896 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 TRMT44Q8IYL2 757 aaKnown RBP11.6□□□□□ -0.55
LINC00343-202ENST00000415294 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 C1QTNF2Q9BXJ5 285 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
LINC00343-202ENST00000415294 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
LINC00343-202ENST00000415294 TRIM50Q86XT4 487 aa11.59□□□□□ -0.55
LINC00343-202ENST00000415294 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
LINC00343-202ENST00000415294 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
LINC00343-202ENST00000415294 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
LINC00343-202ENST00000415294 NCOA4Q13772 614 aa11.58□□□□□ -0.56
LINC00343-202ENST00000415294 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
LINC00343-202ENST00000415294 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
LINC00343-202ENST00000415294 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
LINC00343-202ENST00000415294 WNT7BP56706 349 aa11.57□□□□□ -0.56
LINC00343-202ENST00000415294 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
LINC00343-202ENST00000415294 FOXJ1Q92949 421 aa11.57□□□□□ -0.56
LINC00343-202ENST00000415294 CCDC9Q9Y3X0 531 aaKnown RBP11.57□□□□□ -0.56
LINC00343-202ENST00000415294 ATP1A2P50993 1020 aa11.56□□□□□ -0.56
LINC00343-202ENST00000415294 SH3BP2P78314 561 aa11.56□□□□□ -0.56
LINC00343-202ENST00000415294 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
LINC00343-202ENST00000415294 DEPDC4Q8N2C3 294 aa11.56□□□□□ -0.56
LINC00343-202ENST00000415294 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 Q6ZNB5 142 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
LINC00343-202ENST00000415294 ESPNB1AK53 854 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L15C9J2P7 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L10C9JJH3 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L13C9JLJ4 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L11C9JVI0 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L21D6R901 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L18D6R9N7 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L22D6RA61 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L17D6RBQ6 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L19D6RCP7 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L20D6RJB6 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 RNF223E7ERA6 249 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 RASA1P20936 1047 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 VARSP26640 1264 aaKnown RBP11.54□□□□□ -0.56
LINC00343-202ENST00000415294 RPIAP49247 311 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 USP17L24Q0WX57 530 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 TRIM32Q13049 653 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
LINC00343-202ENST00000415294 NOVA2Q9UNW9 492 aaKnown RBP11.54□□□□□ -0.56
LINC00343-202ENST00000415294 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
LINC00343-202ENST00000415294 PTK7Q13308 1070 aa11.52□□□□□ -0.57
LINC00343-202ENST00000415294 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
LINC00343-202ENST00000415294 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
LINC00343-202ENST00000415294 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
LINC00343-202ENST00000415294 MAP4K5Q9Y4K4 846 aa11.52□□□□□ -0.57
LINC00343-202ENST00000415294 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.57
LINC00343-202ENST00000415294 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
LINC00343-202ENST00000415294 CRTC2Q53ET0 693 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-202ENST00000415294 TMEM164Q5U3C3 297 aa11.5□□□□□ -0.57
LINC00343-202ENST00000415294 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
LINC00343-202ENST00000415294 CCDC85AQ96PX6 553 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-202ENST00000415294 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
LINC00343-202ENST00000415294 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-202ENST00000415294 GFRA3O60609 400 aa11.49□□□□□ -0.57
LINC00343-202ENST00000415294 USP4Q13107 963 aa11.49□□□□□ -0.57
LINC00343-202ENST00000415294 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
LINC00343-202ENST00000415294 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
LINC00343-202ENST00000415294 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
LINC00343-202ENST00000415294 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
LINC00343-202ENST00000415294 STK32AQ8WU08 396 aa11.48□□□□□ -0.57
LINC00343-202ENST00000415294 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
LINC00343-202ENST00000415294 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 204.5 ms