RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 DEPDC4Q8N2C3 294 aa11.82□□□□□ -0.52
SMC4P1-201ENST00000414479 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
SMC4P1-201ENST00000414479 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
SMC4P1-201ENST00000414479 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
SMC4P1-201ENST00000414479 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
SMC4P1-201ENST00000414479 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
SMC4P1-201ENST00000414479 STK32AQ8WU08 396 aa11.8□□□□□ -0.52
SMC4P1-201ENST00000414479 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
SMC4P1-201ENST00000414479 NOD1Q9Y239 953 aa11.8□□□□□ -0.52
SMC4P1-201ENST00000414479 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
SMC4P1-201ENST00000414479 PTK7Q13308 1070 aa11.78□□□□□ -0.52
SMC4P1-201ENST00000414479 BPHLQ86WA6 291 aaPredicted RBP11.78□□□□□ -0.52
SMC4P1-201ENST00000414479 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
SMC4P1-201ENST00000414479 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
SMC4P1-201ENST00000414479 AGERQ15109 404 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 ANKMY2Q8IV38 441 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 PHTF2Q8N3S3 785 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
SMC4P1-201ENST00000414479 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 TLL1O43897 1013 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 SLC10A4Q96EP9 437 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 MTRQ99707 1265 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 CHIC2Q9UKJ5 165 aa11.76□□□□□ -0.53
SMC4P1-201ENST00000414479 OGFOD1Q8N543 542 aa11.75□□□□□ -0.53
SMC4P1-201ENST00000414479 CLP1Q92989 425 aaKnown RBP11.75□□□□□ -0.53
SMC4P1-201ENST00000414479 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
SMC4P1-201ENST00000414479 CDV3Q9UKY7 258 aaKnown RBP11.75□□□□□ -0.53
SMC4P1-201ENST00000414479 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
SMC4P1-201ENST00000414479 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
SMC4P1-201ENST00000414479 DNAAF2Q9NVR5 837 aaKnown RBP11.74□□□□□ -0.53
SMC4P1-201ENST00000414479 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
SMC4P1-201ENST00000414479 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
SMC4P1-201ENST00000414479 SSFA2P28290 1259 aa11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 DPYDQ12882 1025 aa11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 TRIM52Q96A61 297 aa11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
SMC4P1-201ENST00000414479 ATP2B4P23634 1241 aa11.7□□□□□ -0.54
SMC4P1-201ENST00000414479 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
SMC4P1-201ENST00000414479 OXLD1Q5BKU9 147 aa11.7□□□□□ -0.54
SMC4P1-201ENST00000414479 TXNDC2Q86VQ3 553 aa11.7□□□□□ -0.54
SMC4P1-201ENST00000414479 SEPT12Q8IYM1 358 aa11.69□□□□□ -0.54
SMC4P1-201ENST00000414479 SIX5Q8N196 739 aa11.69□□□□□ -0.54
SMC4P1-201ENST00000414479 ZNF511Q8NB15 262 aa11.69□□□□□ -0.54
SMC4P1-201ENST00000414479 GTF2IP78347 998 aa11.68□□□□□ -0.54
SMC4P1-201ENST00000414479 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
SMC4P1-201ENST00000414479 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
SMC4P1-201ENST00000414479 BAP1Q92560 729 aa11.68□□□□□ -0.54
SMC4P1-201ENST00000414479 ERCC3P19447 782 aa11.67□□□□□ -0.54
SMC4P1-201ENST00000414479 SEC13P55735 322 aa11.67□□□□□ -0.54
SMC4P1-201ENST00000414479 PSME1Q06323 249 aa11.67□□□□□ -0.54
SMC4P1-201ENST00000414479 USP4Q13107 963 aa11.67□□□□□ -0.54
SMC4P1-201ENST00000414479 CLDN10P78369 228 aa11.66□□□□□ -0.54
SMC4P1-201ENST00000414479 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
SMC4P1-201ENST00000414479 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 TJAP1Q5JTD0 557 aa11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 C1orf216Q8TAB5 229 aa11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
SMC4P1-201ENST00000414479 E9PSI1 815 aa11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 PTPN5P54829 565 aa11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
SMC4P1-201ENST00000414479 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
SMC4P1-201ENST00000414479 CCDC102BQ68D86 513 aa11.63□□□□□ -0.55
SMC4P1-201ENST00000414479 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
SMC4P1-201ENST00000414479 FOXJ1Q92949 421 aa11.63□□□□□ -0.55
SMC4P1-201ENST00000414479 S1PR4O95977 384 aa11.62□□□□□ -0.55
SMC4P1-201ENST00000414479 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
SMC4P1-201ENST00000414479 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
SMC4P1-201ENST00000414479 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
SMC4P1-201ENST00000414479 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
SMC4P1-201ENST00000414479 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
SMC4P1-201ENST00000414479 SOWAHDA6NJG2 315 aa11.59□□□□□ -0.55
SMC4P1-201ENST00000414479 ESPNB1AK53 854 aa11.59□□□□□ -0.55
SMC4P1-201ENST00000414479 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
SMC4P1-201ENST00000414479 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
SMC4P1-201ENST00000414479 GGCXP38435 758 aa11.58□□□□□ -0.56
SMC4P1-201ENST00000414479 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
SMC4P1-201ENST00000414479 PRMT3O60678 531 aa11.57□□□□□ -0.56
SMC4P1-201ENST00000414479 CXXC1Q9P0U4 656 aaPredicted RBP11.57□□□□□ -0.56
SMC4P1-201ENST00000414479 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
SMC4P1-201ENST00000414479 EGFL7Q9UHF1 273 aa11.57□□□□□ -0.56
SMC4P1-201ENST00000414479 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
SMC4P1-201ENST00000414479 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
SMC4P1-201ENST00000414479 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms