RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 ZEB1P37275 1124 aaPredicted RBP7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 KIF12Q96FN5 646 aa7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 ZBTB3Q9H5J0 574 aa7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 G3BP2Q9UN86 482 aaKnown RBP7.81□□□□□ -1.16
CBX1P3-201ENST00000413296 PIK3CDO00329 1044 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 HOXA2O43364 376 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 APLP1P51693 650 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 PTK7Q13308 1070 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 SWI5Q1ZZU3 235 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 ZFYVE27Q5T4F4 411 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 PLEKHM2Q8IWE5 1019 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 RGL4Q8IZJ4 473 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 ANO2Q9NQ90 1003 aa7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 MRPL42Q9Y6G3 142 aaKnown RBP7.8□□□□□ -1.16
CBX1P3-201ENST00000413296 USP17L5A8MUK1 530 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 SKIP12755 728 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 PAX3P23760 479 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 ITGAEP38570 1179 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 TNNI2P48788 182 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 FANCCQ00597 558 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 TSHZ1Q6ZSZ6 1077 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
CBX1P3-201ENST00000413296 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 XPCQ01831 940 aaPredicted RBP7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 ARID5AQ03989 594 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 C4orf46Q504U0 113 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 ANKMY2Q8IV38 441 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 EPAS1Q99814 870 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 MAF1Q9H063 256 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 DDX56Q9NY93 547 aaKnown RBP7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
CBX1P3-201ENST00000413296 C21orf2O43822 256 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 DNAJC6O75061 913 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 P4HBP07237 508 aaKnown RBP7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 RASA1P20936 1047 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 TBX4P57082 545 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 RHBDL3P58872 404 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 BIRC2Q13490 618 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 CHADLQ6NUI6 762 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 PADI6Q6TGC4 694 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 MICALL2Q8IY33 904 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 RPUSD2Q8IZ73 545 aaKnown RBP7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 FAM9BQ8IZU0 186 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 HELBQ8NG08 1087 aaPredicted RBP7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 EPS8L1Q8TE68 723 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 MRFAP1L1Q96HT8 127 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 PNMA2Q9UL42 364 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 PRR12Q9ULL5 1215 aa7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
CBX1P3-201ENST00000413296 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 ZNF76P36508 570 aa7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 FOXD4Q12950 439 aaPredicted RBP7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 DEPDC4Q8N2C3 294 aa7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 SPC25Q9HBM1 224 aa7.76□□□□□ -1.17
CBX1P3-201ENST00000413296 XRCC5P13010 732 aaKnown RBP7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 FMNL3Q8IVF7 1028 aa7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 RPS6KC1Q96S38 1066 aa7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 TMEM106CQ9BVX2 250 aa7.75□□□□□ -1.17
CBX1P3-201ENST00000413296 ATP5J2-PTCD1G3V325 749 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 KIF3CO14782 793 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 PRC1O43663 620 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 PAK3O75914 559 aaPredicted RBP7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 PHF14O94880 888 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 ECM1Q16610 540 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 CLEC4GQ6UXB4 293 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 ILDR1Q86SU0 546 aaPredicted RBP7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 PNISRQ8TF01 805 aaKnown RBP7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 TSC1Q92574 1164 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 GEMIN8Q9NWZ8 242 aaKnown RBP7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 RB1CC1Q8TDY2 1594 aa7.74□□□□□ -1.17
CBX1P3-201ENST00000413296 ENPP3O14638 875 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 PPP1R12AO14974 1030 aaPredicted RBP7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 FXR2P51116 673 aaKnown RBP eCLIP7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 ARHGAP4P98171 946 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 KRBA2Q6ZNG9 492 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 SULF1Q8IWU6 871 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 STAG1Q8WVM7 1258 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 INPP5FQ9Y2H2 1132 aa7.73□□□□□ -1.17
CBX1P3-201ENST00000413296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 SORBS3O60504 671 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 WDHD1O75717 1129 aaPredicted RBP7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 DPYDQ12882 1025 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 CNPY4Q8N129 248 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 JDP2Q8WYK2 163 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 PRKAB1Q9Y478 270 aa7.72□□□□□ -1.17
CBX1P3-201ENST00000413296 PRMT3O60678 531 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 MCCP23508 829 aa7.71□□□□□ -1.18
CBX1P3-201ENST00000413296 FKBP4Q02790 459 aaKnown RBP eCLIP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms