RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 RPAP2Q8IXW5 612 aaPredicted RBP20.33■□□□□ 0.84
PCDHA13-202ENST00000409494 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.84
PCDHA13-202ENST00000409494 ALDH1L2Q3SY69 923 aa20.33■□□□□ 0.84
PCDHA13-202ENST00000409494 CCDC158Q5M9N0 1113 aa20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 NME9Q86XW9 330 aa20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 CLSTN1O94985 981 aa20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 NFKBIBQ15653 356 aa20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 NOB1Q9ULX3 412 aaKnown RBP20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
PCDHA13-202ENST00000409494 ZNF652Q9Y2D9 606 aa20.31■□□□□ 0.84
PCDHA13-202ENST00000409494 TOM1O60784 492 aa20.31■□□□□ 0.84
PCDHA13-202ENST00000409494 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
PCDHA13-202ENST00000409494 PTPRKQ15262 1439 aa20.31■□□□□ 0.84
PCDHA13-202ENST00000409494 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
PCDHA13-202ENST00000409494 SLFN5Q08AF3 891 aa20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 TSR2Q969E8 191 aaKnown RBP20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 MCM2P49736 904 aa20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 WASHC4Q2M389 1173 aa20.3■□□□□ 0.84
PCDHA13-202ENST00000409494 ARHGEF12Q9NZN5 1544 aa20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 SLC3A2P08195 630 aaKnown RBP20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 CHMP5Q9NZZ3 219 aa20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 TMOD3Q9NYL9 352 aa20.29■□□□□ 0.84
PCDHA13-202ENST00000409494 MVPQ14764 893 aaKnown RBP20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 SART3Q15020 963 aaKnown RBP20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 FSD1Q9BTV5 496 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 HSP90AB3PQ58FF7 597 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 ZSCAN25Q6NSZ9 544 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 ACEP12821 1306 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 NUCB2P80303 420 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 CCDC47Q96A33 483 aaKnown RBP20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 BACH2Q9BYV9 841 aa20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
PCDHA13-202ENST00000409494 SAFBQ15424 915 aaKnown RBP eCLIP20.27■□□□□ 0.84
PCDHA13-202ENST00000409494 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.84
PCDHA13-202ENST00000409494 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
PCDHA13-202ENST00000409494 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
PCDHA13-202ENST00000409494 CCDC57Q2TAC2 916 aa20.27■□□□□ 0.84
PCDHA13-202ENST00000409494 NFXL1Q6ZNB6 911 aa20.26■□□□□ 0.83
PCDHA13-202ENST00000409494 FBXW7Q969H0 707 aa20.26■□□□□ 0.83
PCDHA13-202ENST00000409494 DDX49Q9Y6V7 483 aaKnown RBP20.26■□□□□ 0.83
PCDHA13-202ENST00000409494 IL16Q14005 1332 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 C19orf44Q9H6X5 657 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 HOOK1Q9UJC3 728 aaKnown RBP20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 EXOC5O00471 708 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 XBP1P17861 261 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 ATP7AQ04656 1500 aa20.25■□□□□ 0.83
PCDHA13-202ENST00000409494 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
PCDHA13-202ENST00000409494 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
PCDHA13-202ENST00000409494 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
PCDHA13-202ENST00000409494 CEP126Q9P2H0 1117 aa20.23■□□□□ 0.83
PCDHA13-202ENST00000409494 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
PCDHA13-202ENST00000409494 SMC3Q9UQE7 1217 aa20.23■□□□□ 0.83
PCDHA13-202ENST00000409494 CCDC27Q2M243 656 aa20.22■□□□□ 0.83
PCDHA13-202ENST00000409494 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
PCDHA13-202ENST00000409494 TRPM2O94759 1503 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 NGLY1Q96IV0 654 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 TTC39AQ5SRH9 613 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 HYPKQ9NX55 129 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 TCEAL9Q9UHQ7 104 aa20.21■□□□□ 0.83
PCDHA13-202ENST00000409494 NACAP1Q9BZK3 213 aa20.2■□□□□ 0.82
PCDHA13-202ENST00000409494 BRMS1Q9HCU9 246 aa20.2■□□□□ 0.82
PCDHA13-202ENST00000409494 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
PCDHA13-202ENST00000409494 EMILIN1Q9Y6C2 1016 aa20.2■□□□□ 0.82
PCDHA13-202ENST00000409494 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
PCDHA13-202ENST00000409494 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
PCDHA13-202ENST00000409494 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
PCDHA13-202ENST00000409494 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
PCDHA13-202ENST00000409494 TPM2P07951 284 aa20.19■□□□□ 0.82
PCDHA13-202ENST00000409494 PDCP20941 246 aa20.19■□□□□ 0.82
PCDHA13-202ENST00000409494 MYL6BP14649 208 aa20.18■□□□□ 0.82
PCDHA13-202ENST00000409494 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
PCDHA13-202ENST00000409494 BCAR3O75815 825 aa20.18■□□□□ 0.82
PCDHA13-202ENST00000409494 IGHMBP2P38935 993 aaKnown RBP20.18■□□□□ 0.82
PCDHA13-202ENST00000409494 PTPRCP08575 1304 aa20.17■□□□□ 0.82
PCDHA13-202ENST00000409494 AKAP2Q9Y2D5 859 aa20.17■□□□□ 0.82
PCDHA13-202ENST00000409494 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
PCDHA13-202ENST00000409494 UHRF1BP1Q6BDS2 1440 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 RABEP1Q15276 862 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 FOXD4L5Q5VV16 416 aaPredicted RBP20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 FOXD4L4Q8WXT5 416 aaPredicted RBP20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 PPIP5K1Q6PFW1 1433 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
PCDHA13-202ENST00000409494 PDIA4P13667 645 aaKnown RBP20.15■□□□□ 0.82
PCDHA13-202ENST00000409494 KLHL34Q8N239 644 aa20.15■□□□□ 0.82
PCDHA13-202ENST00000409494 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
PCDHA13-202ENST00000409494 ANKRD1Q15327 319 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms