RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
MIR1249-201ENST00000408671 ACEP12821 1306 aa16.82■□□□□ 0.28
MIR1249-201ENST00000408671 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
MIR1249-201ENST00000408671 SLC15A2Q16348 729 aa16.81■□□□□ 0.28
MIR1249-201ENST00000408671 DDB1Q16531 1140 aa16.81■□□□□ 0.28
MIR1249-201ENST00000408671 SLIT3O75094 1523 aa16.8■□□□□ 0.28
MIR1249-201ENST00000408671 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
MIR1249-201ENST00000408671 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
MIR1249-201ENST00000408671 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
MIR1249-201ENST00000408671 GCP02774 474 aa16.79■□□□□ 0.28
MIR1249-201ENST00000408671 TXNRD1Q16881 649 aa16.79■□□□□ 0.28
MIR1249-201ENST00000408671 STK32BQ9NY57 414 aa16.79■□□□□ 0.28
MIR1249-201ENST00000408671 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
MIR1249-201ENST00000408671 CCDC61Q9Y6R9 512 aa16.78■□□□□ 0.28
MIR1249-201ENST00000408671 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
MIR1249-201ENST00000408671 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
MIR1249-201ENST00000408671 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
MIR1249-201ENST00000408671 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
MIR1249-201ENST00000408671 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
MIR1249-201ENST00000408671 ARXQ96QS3 562 aa16.75■□□□□ 0.27
MIR1249-201ENST00000408671 CDCA7Q9BWT1 371 aaPredicted RBP16.74■□□□□ 0.27
MIR1249-201ENST00000408671 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
MIR1249-201ENST00000408671 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
MIR1249-201ENST00000408671 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
MIR1249-201ENST00000408671 BTAF1O14981 1849 aa16.73■□□□□ 0.27
MIR1249-201ENST00000408671 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
MIR1249-201ENST00000408671 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
MIR1249-201ENST00000408671 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
MIR1249-201ENST00000408671 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
MIR1249-201ENST00000408671 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
MIR1249-201ENST00000408671 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
MIR1249-201ENST00000408671 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
MIR1249-201ENST00000408671 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
MIR1249-201ENST00000408671 GPR162Q16538 588 aa16.69■□□□□ 0.26
MIR1249-201ENST00000408671 AXIN2Q9Y2T1 843 aa16.69■□□□□ 0.26
MIR1249-201ENST00000408671 ABCC6O95255 1503 aa16.69■□□□□ 0.26
MIR1249-201ENST00000408671 USP6P35125 1406 aa16.69■□□□□ 0.26
MIR1249-201ENST00000408671 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
MIR1249-201ENST00000408671 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
MIR1249-201ENST00000408671 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
MIR1249-201ENST00000408671 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
MIR1249-201ENST00000408671 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
MIR1249-201ENST00000408671 NLRP6P59044 892 aa16.64■□□□□ 0.25
MIR1249-201ENST00000408671 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
MIR1249-201ENST00000408671 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
MIR1249-201ENST00000408671 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
MIR1249-201ENST00000408671 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
MIR1249-201ENST00000408671 KAT6BQ8WYB5 2073 aa16.63■□□□□ 0.25
MIR1249-201ENST00000408671 NFAT5O94916 1531 aa16.62■□□□□ 0.25
MIR1249-201ENST00000408671 EXOC5O00471 708 aa16.62■□□□□ 0.25
MIR1249-201ENST00000408671 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
MIR1249-201ENST00000408671 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
MIR1249-201ENST00000408671 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
MIR1249-201ENST00000408671 LY75O60449 1722 aa16.59■□□□□ 0.25
MIR1249-201ENST00000408671 NLGN2Q8NFZ4 835 aa16.59■□□□□ 0.25
MIR1249-201ENST00000408671 YBX3P16989 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
MIR1249-201ENST00000408671 POLD1P28340 1107 aa16.58■□□□□ 0.24
MIR1249-201ENST00000408671 SRPK2P78362 688 aaKnown RBP16.58■□□□□ 0.24
MIR1249-201ENST00000408671 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
MIR1249-201ENST00000408671 USP54Q70EL1 1684 aa16.57■□□□□ 0.24
MIR1249-201ENST00000408671 ADCY9O60503 1353 aa16.57■□□□□ 0.24
MIR1249-201ENST00000408671 HSPA6P17066 643 aa16.57■□□□□ 0.24
MIR1249-201ENST00000408671 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
MIR1249-201ENST00000408671 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
MIR1249-201ENST00000408671 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
MIR1249-201ENST00000408671 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
MIR1249-201ENST00000408671 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
MIR1249-201ENST00000408671 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
MIR1249-201ENST00000408671 CABP1Q9NZU7 370 aa16.56■□□□□ 0.24
MIR1249-201ENST00000408671 LTN1O94822 1766 aa16.56■□□□□ 0.24
MIR1249-201ENST00000408671 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
MIR1249-201ENST00000408671 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
MIR1249-201ENST00000408671 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
MIR1249-201ENST00000408671 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
MIR1249-201ENST00000408671 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
MIR1249-201ENST00000408671 ERBB3P21860 1342 aa16.51■□□□□ 0.23
MIR1249-201ENST00000408671 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
MIR1249-201ENST00000408671 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
MIR1249-201ENST00000408671 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
MIR1249-201ENST00000408671 DOT1LQ8TEK3 1739 aa16.5■□□□□ 0.23
MIR1249-201ENST00000408671 TTC21AQ8NDW8 1320 aa16.49■□□□□ 0.23
MIR1249-201ENST00000408671 IL2RBP14784 551 aa16.49■□□□□ 0.23
MIR1249-201ENST00000408671 FAM208AQ9UK61 1670 aaKnown RBP16.48■□□□□ 0.23
MIR1249-201ENST00000408671 SOX12O15370 315 aa16.47■□□□□ 0.23
MIR1249-201ENST00000408671 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
MIR1249-201ENST00000408671 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
MIR1249-201ENST00000408671 NSD2O96028 1365 aa16.46■□□□□ 0.23
MIR1249-201ENST00000408671 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
MIR1249-201ENST00000408671 C5P01031 1676 aa16.44■□□□□ 0.22
MIR1249-201ENST00000408671 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
MIR1249-201ENST00000408671 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
MIR1249-201ENST00000408671 KCNQ4P56696 695 aa16.43■□□□□ 0.22
MIR1249-201ENST00000408671 NLRP2Q9NX02 1062 aa16.43■□□□□ 0.22
MIR1249-201ENST00000408671 CD2APQ9Y5K6 639 aa16.43■□□□□ 0.22
MIR1249-201ENST00000408671 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
MIR1249-201ENST00000408671 KIF3CO14782 793 aa16.42■□□□□ 0.22
MIR1249-201ENST00000408671 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
MIR1249-201ENST00000408671 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
MIR1249-201ENST00000408671 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
MIR1249-201ENST00000408671 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms