RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ERCC6L2Q5T890 1561 aa5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 HECW2Q9P2P5 1572 aa5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 RNF20Q5VTR2 975 aa5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 TMX4Q9H1E5 349 aaPredicted RBP5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 ATP6V1DQ9Y5K8 247 aa5.8□□□□□ -1.48
PCDH11X-207ENST00000406881 SHROOM2Q13796 1616 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 GOLGA6L6A8MZA4 724 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 CADPS2Q86UW7 1296 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 A0A1W2PP64 1363 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 NRDCO43847 1150 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 ARHGAP31Q2M1Z3 1444 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 UNC13BO14795 1591 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 PTPRCP08575 1304 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 TET3O43151 1660 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 HIP1O00291 1037 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 TMEM57Q8N5G2 664 aa5.79□□□□□ -1.48
PCDH11X-207ENST00000406881 KDM5CP41229 1560 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 EDC4Q6P2E9 1401 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 YEATS2Q9ULM3 1422 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 CABP4P57796 275 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 CHD1LQ86WJ1 897 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 PLA2R1Q13018 1463 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 BTBD11A6QL63 1104 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 MCM2P49736 904 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 NUCB2P80303 420 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 TOM1L2Q6ZVM7 507 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 CNTROBQ8N137 903 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 POLKQ9UBT6 870 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 DMRT2Q9Y5R5 561 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 TMEM2Q9UHN6 1383 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 ANO2Q9NQ90 1003 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 CROCC2H7BZ55 1655 aa5.78□□□□□ -1.48
PCDH11X-207ENST00000406881 PHF14O94880 888 aa5.77□□□□□ -1.48
PCDH11X-207ENST00000406881 AIMP1Q12904 312 aaKnown RBP5.77□□□□□ -1.48
PCDH11X-207ENST00000406881 GNL2Q13823 731 aaKnown RBP5.77□□□□□ -1.48
PCDH11X-207ENST00000406881 KRT28Q7Z3Y7 464 aa5.77□□□□□ -1.48
PCDH11X-207ENST00000406881 GOLGA6L3A6NEY3 463 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 RABEP1Q15276 862 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 LRRCC1Q9C099 1032 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 FLT4P35916 1363 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 FOXO3O43524 673 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 MCM10Q7L590 875 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 CCDC34Q96HJ3 373 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 THUMPD2Q9BTF0 503 aaKnown RBP5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 SOS1Q07889 1333 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 KIF6Q6ZMV9 814 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 ANO8Q9HCE9 1232 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 PRDM15P57071 1507 aaPredicted RBP5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 EFCAB6Q5THR3 1501 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 ABCA9Q8IUA7 1624 aa5.77□□□□□ -1.49
PCDH11X-207ENST00000406881 KDM5AP29375 1690 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 C20orf194Q5TEA3 1177 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 CPLX2Q6PUV4 134 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 ABCC3O15438 1527 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 RAB11FIP3O75154 756 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 TRIM27P14373 513 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 ZC3H6P61129 1189 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 SYTL4Q96C24 671 aaPredicted RBP5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 C1orf115Q9H7X2 142 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 PLEKHG3A1L390 1219 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 HMGB2P26583 209 aaKnown RBP5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 SYNMO15061 1565 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 ZMYM4Q5VZL5 1548 aa5.76□□□□□ -1.49
PCDH11X-207ENST00000406881 PLEKHH1Q9ULM0 1364 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 NPHP3Q7Z494 1330 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 SLC4A3P48751 1232 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 STRN4Q9NRL3 753 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 MBIPQ9NS73 344 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 MSH6P52701 1360 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 FRAT2O75474 233 aaPredicted RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 PSMA5P28066 241 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 HDAC1Q13547 482 aaPredicted RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 DCTN1Q14203 1278 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 EIF4A2Q14240 407 aaKnown RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 LARP1Q6PKG0 1096 aaKnown RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 ERVK-7P63135 1459 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 XPCQ01831 940 aaPredicted RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 TPRNQ4KMQ1 711 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 C19orf44Q9H6X5 657 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 FOXD4L1Q9NU39 408 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 HYPKQ9NX55 129 aa5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 DBF4Q9UBU7 674 aaPredicted RBP5.75□□□□□ -1.49
PCDH11X-207ENST00000406881 PLCB2Q00722 1185 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 HSP90AB2PQ58FF8 381 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 FAM184AQ8NB25 1140 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 BABAM1Q9NWV8 329 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 KIF1BO60333 1816 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 CDC42BPBQ9Y5S2 1711 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 LMTK2Q8IWU2 1503 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 RNF123Q5XPI4 1314 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 IL27Q8NEV9 243 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 PIK3R4Q99570 1358 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 KCNA6P17658 529 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 GSE1Q14687 1217 aa5.74□□□□□ -1.49
PCDH11X-207ENST00000406881 SYNE3Q6ZMZ3 975 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms