RNA–Protein interactions for RNA: ENST00000404771.8

KCNMA1-210, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-210ENST00000404771 TNRQ92752 1358 aa16.59■□□□□ 0.25
KCNMA1-210ENST00000404771 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.25
KCNMA1-210ENST00000404771 GNAI2P04899 355 aa16.58■□□□□ 0.25
KCNMA1-210ENST00000404771 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
KCNMA1-210ENST00000404771 CABP4P57796 275 aa16.57■□□□□ 0.24
KCNMA1-210ENST00000404771 APPP05067 770 aa16.57■□□□□ 0.24
KCNMA1-210ENST00000404771 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
KCNMA1-210ENST00000404771 PARD3Q8TEW0 1356 aa16.57■□□□□ 0.24
KCNMA1-210ENST00000404771 PLEKHH1Q9ULM0 1364 aa16.57■□□□□ 0.24
KCNMA1-210ENST00000404771 KCNA6P17658 529 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 FOSBP53539 338 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
KCNMA1-210ENST00000404771 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
KCNMA1-210ENST00000404771 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 CDC45O75419 566 aa16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
KCNMA1-210ENST00000404771 NEK4P51957 841 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 RLBP1P12271 317 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 DRC7Q8IY82 874 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 CHMP5Q9NZZ3 219 aa16.53■□□□□ 0.24
KCNMA1-210ENST00000404771 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.24
KCNMA1-210ENST00000404771 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.24
KCNMA1-210ENST00000404771 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.24
KCNMA1-210ENST00000404771 KDM4AO75164 1064 aa16.52■□□□□ 0.23
KCNMA1-210ENST00000404771 ZKSCAN1P17029 563 aaPredicted RBP16.52■□□□□ 0.23
KCNMA1-210ENST00000404771 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.23
KCNMA1-210ENST00000404771 LRRC59Q96AG4 307 aaKnown RBP16.52■□□□□ 0.23
KCNMA1-210ENST00000404771 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
KCNMA1-210ENST00000404771 A0A1W2PP64 1363 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 AAMPQ13685 434 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 EIF4A2Q14240 407 aaKnown RBP16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 IFT57Q9NWB7 429 aa16.5■□□□□ 0.23
KCNMA1-210ENST00000404771 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 KCNH5Q8NCM2 988 aa16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 CCT4P50991 539 aaKnown RBP16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
KCNMA1-210ENST00000404771 PANK2Q9BZ23 570 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 YEATS2Q9ULM3 1422 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 G3V3G9 751 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 ADGRL2O95490 1459 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 PPIP5K1Q6PFW1 1433 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
KCNMA1-210ENST00000404771 ERC2O15083 957 aa16.47■□□□□ 0.23
KCNMA1-210ENST00000404771 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
KCNMA1-210ENST00000404771 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
KCNMA1-210ENST00000404771 PDCL3Q9H2J4 239 aa16.47■□□□□ 0.23
KCNMA1-210ENST00000404771 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 H3BQV1 296 aa16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 IFFO2Q5TF58 517 aa16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
KCNMA1-210ENST00000404771 LTKP29376 864 aa16.46■□□□□ 0.22
KCNMA1-210ENST00000404771 TRAK2O60296 914 aa16.45■□□□□ 0.22
KCNMA1-210ENST00000404771 TPM2P07951 284 aa16.45■□□□□ 0.22
KCNMA1-210ENST00000404771 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
KCNMA1-210ENST00000404771 MPNDQ8N594 471 aa16.45■□□□□ 0.22
KCNMA1-210ENST00000404771 LRRFIP2Q9Y608 721 aaKnown RBP16.45■□□□□ 0.22
KCNMA1-210ENST00000404771 FLIIQ13045 1269 aa16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 ESPNB1AK53 854 aa16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 SF3A1Q15459 793 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-210ENST00000404771 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms