RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 PPP1R9BQ96SB3 815 aa22.31■■□□□ 1.16
KDM1A-202ENST00000400181 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
KDM1A-202ENST00000400181 ZSCAN23Q3MJ62 389 aa22.31■■□□□ 1.16
KDM1A-202ENST00000400181 SETBP1Q9Y6X0 1596 aa22.3■■□□□ 1.16
KDM1A-202ENST00000400181 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
KDM1A-202ENST00000400181 CABP1Q9NZU7 370 aa22.3■■□□□ 1.16
KDM1A-202ENST00000400181 RBSNQ9H1K0 784 aa22.3■■□□□ 1.16
KDM1A-202ENST00000400181 XPCQ01831 940 aaPredicted RBP22.29■■□□□ 1.16
KDM1A-202ENST00000400181 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
KDM1A-202ENST00000400181 PLEKHM2Q8IWE5 1019 aa22.29■■□□□ 1.16
KDM1A-202ENST00000400181 FAM13BQ9NYF5 915 aa22.29■■□□□ 1.16
KDM1A-202ENST00000400181 SMARCA5O60264 1052 aaPredicted RBP22.29■■□□□ 1.16
KDM1A-202ENST00000400181 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
KDM1A-202ENST00000400181 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
KDM1A-202ENST00000400181 FCHSD2O94868 740 aa22.28■■□□□ 1.16
KDM1A-202ENST00000400181 DCTN1Q14203 1278 aa22.28■■□□□ 1.16
KDM1A-202ENST00000400181 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
KDM1A-202ENST00000400181 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
KDM1A-202ENST00000400181 C8orf58Q8NAV2 365 aa22.28■■□□□ 1.16
KDM1A-202ENST00000400181 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
KDM1A-202ENST00000400181 RABEP1Q15276 862 aa22.27■■□□□ 1.16
KDM1A-202ENST00000400181 LMBRD1Q9NUN5 540 aa22.27■■□□□ 1.15
KDM1A-202ENST00000400181 NEURL4Q96JN8 1562 aa22.26■■□□□ 1.15
KDM1A-202ENST00000400181 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
KDM1A-202ENST00000400181 CFAP74Q9C0B2 1584 aa22.26■■□□□ 1.15
KDM1A-202ENST00000400181 ZC3H13Q5T200 1668 aaKnown RBP22.26■■□□□ 1.15
KDM1A-202ENST00000400181 RNF214Q8ND24 703 aa22.26■■□□□ 1.15
KDM1A-202ENST00000400181 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
KDM1A-202ENST00000400181 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
KDM1A-202ENST00000400181 OFD1O75665 1012 aa22.25■■□□□ 1.15
KDM1A-202ENST00000400181 NUCB2P80303 420 aa22.25■■□□□ 1.15
KDM1A-202ENST00000400181 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
KDM1A-202ENST00000400181 GLI2P10070 1586 aa22.25■■□□□ 1.15
KDM1A-202ENST00000400181 USP32Q8NFA0 1604 aa22.25■■□□□ 1.15
KDM1A-202ENST00000400181 FOXD4L6Q3SYB3 417 aaPredicted RBP22.25■■□□□ 1.15
KDM1A-202ENST00000400181 FOXD4L3Q6VB84 417 aaPredicted RBP22.25■■□□□ 1.15
KDM1A-202ENST00000400181 TPRNQ4KMQ1 711 aa22.24■■□□□ 1.15
KDM1A-202ENST00000400181 NOL8Q76FK4 1167 aaKnown RBP22.24■■□□□ 1.15
KDM1A-202ENST00000400181 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
KDM1A-202ENST00000400181 USP26Q9BXU7 913 aa22.24■■□□□ 1.15
KDM1A-202ENST00000400181 TTC22Q5TAA0 569 aa22.23■■□□□ 1.15
KDM1A-202ENST00000400181 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
KDM1A-202ENST00000400181 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
KDM1A-202ENST00000400181 IDI1Q13907 227 aa22.23■■□□□ 1.15
KDM1A-202ENST00000400181 PUS7Q96PZ0 661 aaKnown RBP22.23■■□□□ 1.15
KDM1A-202ENST00000400181 CDK19Q9BWU1 502 aa22.23■■□□□ 1.15
KDM1A-202ENST00000400181 GNAI1P63096 354 aa22.22■■□□□ 1.15
KDM1A-202ENST00000400181 PDCL3Q9H2J4 239 aa22.22■■□□□ 1.15
KDM1A-202ENST00000400181 SYCE3A1L190 88 aa22.22■■□□□ 1.15
KDM1A-202ENST00000400181 KRT24Q2M2I5 525 aa22.22■■□□□ 1.15
KDM1A-202ENST00000400181 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
KDM1A-202ENST00000400181 ZNF445P59923 1031 aa22.21■■□□□ 1.15
KDM1A-202ENST00000400181 MPNDQ8N594 471 aa22.21■■□□□ 1.15
KDM1A-202ENST00000400181 NSFL1CQ9UNZ2 370 aaKnown RBP22.21■■□□□ 1.15
KDM1A-202ENST00000400181 PPLO60437 1756 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 SDSP20132 328 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 INTS3Q68E01 1043 aaKnown RBP22.2■■□□□ 1.14
KDM1A-202ENST00000400181 ARHGAP45Q92619 1136 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 ABCC4O15439 1325 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 MED14O60244 1454 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 CLEC17AQ6ZS10 378 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
KDM1A-202ENST00000400181 ST18O60284 1047 aa22.19■■□□□ 1.14
KDM1A-202ENST00000400181 API5Q9BZZ5 524 aaKnown RBP22.19■■□□□ 1.14
KDM1A-202ENST00000400181 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
KDM1A-202ENST00000400181 ZRANB1Q9UGI0 708 aa22.19■■□□□ 1.14
KDM1A-202ENST00000400181 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
KDM1A-202ENST00000400181 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
KDM1A-202ENST00000400181 TMEM63CQ9P1W3 806 aa22.17■■□□□ 1.14
KDM1A-202ENST00000400181 IFT57Q9NWB7 429 aa22.17■■□□□ 1.14
KDM1A-202ENST00000400181 BRPF1P55201 1214 aaPredicted RBP22.17■■□□□ 1.14
KDM1A-202ENST00000400181 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
KDM1A-202ENST00000400181 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 UQCRHLA0A096LP55 91 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 UQCRHP07919 91 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 TSHZ3Q63HK5 1081 aa22.16■■□□□ 1.14
KDM1A-202ENST00000400181 CYP2E1P05181 493 aaPredicted RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 IBTKQ9P2D0 1353 aaPredicted RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 PTCH1Q13635 1447 aa22.15■■□□□ 1.14
KDM1A-202ENST00000400181 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
KDM1A-202ENST00000400181 NOL7Q9UMY1 257 aaKnown RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
KDM1A-202ENST00000400181 RAPGEF3O95398 923 aa22.14■■□□□ 1.13
KDM1A-202ENST00000400181 PTMAP06454 111 aaKnown RBP22.14■■□□□ 1.13
KDM1A-202ENST00000400181 NEK4P51957 841 aa22.14■■□□□ 1.13
KDM1A-202ENST00000400181 WAPLQ7Z5K2 1190 aa22.14■■□□□ 1.13
KDM1A-202ENST00000400181 PNPLA6Q8IY17 1366 aa22.13■■□□□ 1.13
KDM1A-202ENST00000400181 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
KDM1A-202ENST00000400181 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
KDM1A-202ENST00000400181 NME9Q86XW9 330 aa22.12■■□□□ 1.13
KDM1A-202ENST00000400181 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
KDM1A-202ENST00000400181 MEIS3Q99687 375 aa22.12■■□□□ 1.13
KDM1A-202ENST00000400181 CWC22Q9HCG8 908 aaKnown RBP22.12■■□□□ 1.13
KDM1A-202ENST00000400181 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
KDM1A-202ENST00000400181 CD163L1Q9NR16 1453 aa22.11■■□□□ 1.13
KDM1A-202ENST00000400181 SLC4A10Q6U841 1118 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms