RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
IFITM3-201ENST00000399808 ZBTB7AO95365 584 aa21.97■■□□□ 1.11
IFITM3-201ENST00000399808 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
IFITM3-201ENST00000399808 CABP2Q9NPB3 220 aa21.96■■□□□ 1.11
IFITM3-201ENST00000399808 AXIN2Q9Y2T1 843 aa21.96■■□□□ 1.11
IFITM3-201ENST00000399808 CHD4Q14839 1912 aa21.96■■□□□ 1.11
IFITM3-201ENST00000399808 NLRP6P59044 892 aa21.95■■□□□ 1.1
IFITM3-201ENST00000399808 SRPK2P78362 688 aaKnown RBP21.95■■□□□ 1.1
IFITM3-201ENST00000399808 TOM1L2Q6ZVM7 507 aa21.95■■□□□ 1.1
IFITM3-201ENST00000399808 BRD4O60885 1362 aaPredicted RBP21.95■■□□□ 1.1
IFITM3-201ENST00000399808 ZNF784Q8NCA9 323 aaPredicted RBP21.94■■□□□ 1.1
IFITM3-201ENST00000399808 ATF5Q9Y2D1 282 aaPredicted RBP21.94■■□□□ 1.1
IFITM3-201ENST00000399808 PIK3C2AO00443 1686 aa21.93■■□□□ 1.1
IFITM3-201ENST00000399808 BCL9O00512 1426 aa21.93■■□□□ 1.1
IFITM3-201ENST00000399808 USP6P35125 1406 aa21.93■■□□□ 1.1
IFITM3-201ENST00000399808 CABP1Q9NZU7 370 aa21.92■■□□□ 1.1
IFITM3-201ENST00000399808 WDR17Q8IZU2 1322 aa21.91■■□□□ 1.1
IFITM3-201ENST00000399808 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
IFITM3-201ENST00000399808 SYT17Q9BSW7 474 aa21.9■■□□□ 1.1
IFITM3-201ENST00000399808 QRICH2Q9H0J4 1663 aa21.9■■□□□ 1.1
IFITM3-201ENST00000399808 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
IFITM3-201ENST00000399808 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
IFITM3-201ENST00000399808 SGIP1Q9BQI5 828 aa21.89■■□□□ 1.09
IFITM3-201ENST00000399808 FHDC1Q9C0D6 1143 aaPredicted RBP21.89■■□□□ 1.09
IFITM3-201ENST00000399808 ARHGEF25Q86VW2 580 aa21.87■■□□□ 1.09
IFITM3-201ENST00000399808 CDCA7Q9BWT1 371 aaPredicted RBP21.87■■□□□ 1.09
IFITM3-201ENST00000399808 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
IFITM3-201ENST00000399808 CPSF1Q10570 1443 aaKnown RBP21.86■■□□□ 1.09
IFITM3-201ENST00000399808 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
IFITM3-201ENST00000399808 UTRNP46939 3433 aa21.84■■□□□ 1.09
IFITM3-201ENST00000399808 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
IFITM3-201ENST00000399808 MTFR1LQ9H019 292 aa21.83■■□□□ 1.09
IFITM3-201ENST00000399808 EXOC5O00471 708 aa21.82■■□□□ 1.08
IFITM3-201ENST00000399808 NHSQ6T4R5 1651 aa21.82■■□□□ 1.08
IFITM3-201ENST00000399808 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
IFITM3-201ENST00000399808 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
IFITM3-201ENST00000399808 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
IFITM3-201ENST00000399808 SOX12O15370 315 aa21.79■■□□□ 1.08
IFITM3-201ENST00000399808 CSB-PGBD3P0DP91 1061 aa21.79■■□□□ 1.08
IFITM3-201ENST00000399808 C1QTNF8P60827 252 aa21.78■■□□□ 1.08
IFITM3-201ENST00000399808 KCNH5Q8NCM2 988 aa21.78■■□□□ 1.08
IFITM3-201ENST00000399808 NFAT5O94916 1531 aa21.78■■□□□ 1.08
IFITM3-201ENST00000399808 BTAF1O14981 1849 aa21.78■■□□□ 1.08
IFITM3-201ENST00000399808 SENP3-EIF4A1A0A087X0R7 540 aa21.77■■□□□ 1.08
IFITM3-201ENST00000399808 ARXQ96QS3 562 aa21.77■■□□□ 1.08
IFITM3-201ENST00000399808 TNS2Q63HR2 1409 aa21.77■■□□□ 1.08
IFITM3-201ENST00000399808 CCDC7Q96M83 1385 aa21.76■■□□□ 1.07
IFITM3-201ENST00000399808 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
IFITM3-201ENST00000399808 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
IFITM3-201ENST00000399808 EVC2Q86UK5 1308 aa21.74■■□□□ 1.07
IFITM3-201ENST00000399808 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
IFITM3-201ENST00000399808 TTC21AQ8NDW8 1320 aa21.73■■□□□ 1.07
IFITM3-201ENST00000399808 ABCC6O95255 1503 aa21.72■■□□□ 1.07
IFITM3-201ENST00000399808 ZNF827Q17R98 1081 aa21.72■■□□□ 1.07
IFITM3-201ENST00000399808 LRRC4BQ9NT99 713 aa21.72■■□□□ 1.07
IFITM3-201ENST00000399808 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
IFITM3-201ENST00000399808 LTN1O94822 1766 aa21.7■■□□□ 1.06
IFITM3-201ENST00000399808 QSER1Q2KHR3 1735 aa21.69■■□□□ 1.06
IFITM3-201ENST00000399808 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
IFITM3-201ENST00000399808 TUBGCP6Q96RT7 1819 aa21.68■■□□□ 1.06
IFITM3-201ENST00000399808 USP54Q70EL1 1684 aa21.67■■□□□ 1.06
IFITM3-201ENST00000399808 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
IFITM3-201ENST00000399808 ERBB3P21860 1342 aa21.67■■□□□ 1.06
IFITM3-201ENST00000399808 GPR162Q16538 588 aa21.66■■□□□ 1.06
IFITM3-201ENST00000399808 AKT1S1Q96B36 256 aa21.66■■□□□ 1.06
IFITM3-201ENST00000399808 NLRP2Q9NX02 1062 aa21.66■■□□□ 1.06
IFITM3-201ENST00000399808 IL2RBP14784 551 aa21.65■■□□□ 1.06
IFITM3-201ENST00000399808 L3MBTL2Q969R5 705 aa21.65■■□□□ 1.06
IFITM3-201ENST00000399808 USP31Q70CQ4 1352 aa21.64■■□□□ 1.06
IFITM3-201ENST00000399808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
IFITM3-201ENST00000399808 SLC16A10Q8TF71 515 aa21.62■■□□□ 1.05
IFITM3-201ENST00000399808 SHANK3Q9BYB0 1731 aa21.62■■□□□ 1.05
IFITM3-201ENST00000399808 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
IFITM3-201ENST00000399808 NME9Q86XW9 330 aa21.6■■□□□ 1.05
IFITM3-201ENST00000399808 ANKRD24Q8TF21 1146 aa21.6■■□□□ 1.05
IFITM3-201ENST00000399808 CD163L1Q9NR16 1453 aa21.59■■□□□ 1.05
IFITM3-201ENST00000399808 KLHL34Q8N239 644 aa21.59■■□□□ 1.05
IFITM3-201ENST00000399808 NLGN2Q8NFZ4 835 aa21.59■■□□□ 1.05
IFITM3-201ENST00000399808 LY75O60449 1722 aa21.58■■□□□ 1.05
IFITM3-201ENST00000399808 GIGYF1O75420 1035 aaPredicted RBP21.58■■□□□ 1.05
IFITM3-201ENST00000399808 KCNQ4P56696 695 aa21.58■■□□□ 1.05
IFITM3-201ENST00000399808 SBNO2Q9Y2G9 1366 aa21.58■■□□□ 1.04
IFITM3-201ENST00000399808 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
IFITM3-201ENST00000399808 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
IFITM3-201ENST00000399808 POLD1P28340 1107 aa21.56■■□□□ 1.04
IFITM3-201ENST00000399808 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
IFITM3-201ENST00000399808 DDX54Q8TDD1 881 aaKnown RBP21.55■■□□□ 1.04
IFITM3-201ENST00000399808 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
IFITM3-201ENST00000399808 DOT1LQ8TEK3 1739 aa21.54■■□□□ 1.04
IFITM3-201ENST00000399808 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
IFITM3-201ENST00000399808 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
IFITM3-201ENST00000399808 YBX3P16989 372 aaKnown RBP eCLIP21.53■■□□□ 1.042e-11■■□□□ 11.4
IFITM3-201ENST00000399808 TFCP2L1Q9NZI6 479 aa21.53■■□□□ 1.04
IFITM3-201ENST00000399808 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
IFITM3-201ENST00000399808 FAM208AQ9UK61 1670 aaKnown RBP21.51■■□□□ 1.03
IFITM3-201ENST00000399808 PRIM1P49642 420 aaKnown RBP21.51■■□□□ 1.03
IFITM3-201ENST00000399808 NSD2O96028 1365 aa21.5■■□□□ 1.03
IFITM3-201ENST00000399808 IP6K1Q92551 441 aa21.5■■□□□ 1.03
IFITM3-201ENST00000399808 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
IFITM3-201ENST00000399808 ANKRD36BQ8N2N9 1353 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms