RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
RCC1-204ENST00000398958 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
RCC1-204ENST00000398958 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
RCC1-204ENST00000398958 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
RCC1-204ENST00000398958 NECTIN2Q92692 538 aa14.35□□□□□ -0.11
RCC1-204ENST00000398958 NSD2O96028 1365 aa14.35□□□□□ -0.11
RCC1-204ENST00000398958 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
RCC1-204ENST00000398958 MCM10Q7L590 875 aa14.34□□□□□ -0.11
RCC1-204ENST00000398958 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
RCC1-204ENST00000398958 AMPHP49418 695 aa14.34□□□□□ -0.11
RCC1-204ENST00000398958 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
RCC1-204ENST00000398958 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
RCC1-204ENST00000398958 SEC24BO95487 1268 aa14.33□□□□□ -0.12
RCC1-204ENST00000398958 TTC21BQ7Z4L5 1316 aa14.33□□□□□ -0.12
RCC1-204ENST00000398958 CPS1P31327 1500 aa14.33□□□□□ -0.12
RCC1-204ENST00000398958 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
RCC1-204ENST00000398958 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.12
RCC1-204ENST00000398958 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
RCC1-204ENST00000398958 USP32Q8NFA0 1604 aa14.32□□□□□ -0.12
RCC1-204ENST00000398958 BECN1Q14457 450 aa14.32□□□□□ -0.12
RCC1-204ENST00000398958 ARHGAP23Q9P227 1491 aa14.32□□□□□ -0.12
RCC1-204ENST00000398958 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
RCC1-204ENST00000398958 USP19O94966 1318 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 PSME1Q06323 249 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
RCC1-204ENST00000398958 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 TRIM27P14373 513 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 CCDC27Q2M243 656 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
RCC1-204ENST00000398958 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 SLIT1O75093 1534 aa14.31□□□□□ -0.12
RCC1-204ENST00000398958 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
RCC1-204ENST00000398958 ARXQ96QS3 562 aa14.3□□□□□ -0.12
RCC1-204ENST00000398958 TSPYL6Q8N831 410 aa14.3□□□□□ -0.12
RCC1-204ENST00000398958 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
RCC1-204ENST00000398958 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
RCC1-204ENST00000398958 DZIP1LQ8IYY4 767 aaKnown RBP14.29□□□□□ -0.12
RCC1-204ENST00000398958 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
RCC1-204ENST00000398958 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
RCC1-204ENST00000398958 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
RCC1-204ENST00000398958 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
RCC1-204ENST00000398958 TMEM57Q8N5G2 664 aa14.28□□□□□ -0.12
RCC1-204ENST00000398958 C1orf115Q9H7X2 142 aa14.28□□□□□ -0.12
RCC1-204ENST00000398958 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.12
RCC1-204ENST00000398958 MAP3K19Q56UN5 1328 aa14.27□□□□□ -0.13
RCC1-204ENST00000398958 MED14O60244 1454 aa14.26□□□□□ -0.13
RCC1-204ENST00000398958 IL13P35225 146 aa14.26□□□□□ -0.13
RCC1-204ENST00000398958 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
RCC1-204ENST00000398958 FCHSD2O94868 740 aa14.26□□□□□ -0.13
RCC1-204ENST00000398958 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
RCC1-204ENST00000398958 LRRC7Q96NW7 1537 aa14.25□□□□□ -0.13
RCC1-204ENST00000398958 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
RCC1-204ENST00000398958 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
RCC1-204ENST00000398958 PHF8Q9UPP1 1060 aa14.24□□□□□ -0.13
RCC1-204ENST00000398958 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
RCC1-204ENST00000398958 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
RCC1-204ENST00000398958 ADGRB2O60241 1585 aa14.23□□□□□ -0.13
RCC1-204ENST00000398958 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
RCC1-204ENST00000398958 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
RCC1-204ENST00000398958 ATP7BP35670 1465 aa14.23□□□□□ -0.13
RCC1-204ENST00000398958 DLC1Q96QB1 1528 aa14.23□□□□□ -0.13
RCC1-204ENST00000398958 KIF20BQ96Q89 1820 aa14.23□□□□□ -0.13
RCC1-204ENST00000398958 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
RCC1-204ENST00000398958 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
RCC1-204ENST00000398958 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
RCC1-204ENST00000398958 TECPR2O15040 1411 aa14.22□□□□□ -0.13
RCC1-204ENST00000398958 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
RCC1-204ENST00000398958 CPSF1Q10570 1443 aaKnown RBP14.22□□□□□ -0.13
RCC1-204ENST00000398958 GOLGA6L3A6NEY3 463 aa14.21□□□□□ -0.13
RCC1-204ENST00000398958 UPF2Q9HAU5 1272 aaKnown RBP14.21□□□□□ -0.13
RCC1-204ENST00000398958 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.13
RCC1-204ENST00000398958 APBB1O00213 710 aa14.21□□□□□ -0.13
RCC1-204ENST00000398958 XRCC6P12956 609 aaKnown RBP eCLIP14.21□□□□□ -0.13
RCC1-204ENST00000398958 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
RCC1-204ENST00000398958 PKNOX2Q96KN3 472 aa14.21□□□□□ -0.13
RCC1-204ENST00000398958 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
RCC1-204ENST00000398958 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
RCC1-204ENST00000398958 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.14
RCC1-204ENST00000398958 GZF1Q9H116 711 aaPredicted RBP14.21□□□□□ -0.14
RCC1-204ENST00000398958 EDC4Q6P2E9 1401 aaKnown RBP14.2□□□□□ -0.14
RCC1-204ENST00000398958 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
RCC1-204ENST00000398958 EYA1Q99502 592 aa14.2□□□□□ -0.14
RCC1-204ENST00000398958 PNNQ9H307 717 aaKnown RBP14.2□□□□□ -0.14
RCC1-204ENST00000398958 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
RCC1-204ENST00000398958 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
RCC1-204ENST00000398958 TBC1D2Q9BYX2 928 aa14.19□□□□□ -0.14
RCC1-204ENST00000398958 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
RCC1-204ENST00000398958 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
RCC1-204ENST00000398958 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
RCC1-204ENST00000398958 VAMP4O75379 141 aa14.18□□□□□ -0.14
RCC1-204ENST00000398958 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
RCC1-204ENST00000398958 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
RCC1-204ENST00000398958 KNDC1Q76NI1 1749 aa14.18□□□□□ -0.14
RCC1-204ENST00000398958 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
RCC1-204ENST00000398958 USP6P35125 1406 aa14.17□□□□□ -0.14
RCC1-204ENST00000398958 TWISTNBQ3B726 338 aaPredicted RBP14.17□□□□□ -0.14
RCC1-204ENST00000398958 TBC1D32Q96NH3 1257 aa14.17□□□□□ -0.14
RCC1-204ENST00000398958 MCM4P33991 863 aa14.16□□□□□ -0.14
RCC1-204ENST00000398958 DDX19BQ9UMR2 479 aa14.16□□□□□ -0.14
RCC1-204ENST00000398958 FSD2A1L4K1 749 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms