RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 LAMC1P11047 1609 aa18.44■□□□□ 0.54
PFKL-202ENST00000397961 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
PFKL-202ENST00000397961 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
PFKL-202ENST00000397961 GLI2P10070 1586 aa18.43■□□□□ 0.54
PFKL-202ENST00000397961 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
PFKL-202ENST00000397961 SIRT2Q8IXJ6 389 aa18.43■□□□□ 0.54
PFKL-202ENST00000397961 LTKP29376 864 aa18.43■□□□□ 0.54
PFKL-202ENST00000397961 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
PFKL-202ENST00000397961 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
PFKL-202ENST00000397961 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
PFKL-202ENST00000397961 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
PFKL-202ENST00000397961 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 IL1RAPL2Q9NP60 686 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 TRAK2O60296 914 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 NUCB1Q02818 461 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
PFKL-202ENST00000397961 FRMPD1Q5SYB0 1578 aa18.41■□□□□ 0.54
PFKL-202ENST00000397961 MCM4P33991 863 aa18.4■□□□□ 0.54
PFKL-202ENST00000397961 SMC5Q8IY18 1101 aa18.39■□□□□ 0.54
PFKL-202ENST00000397961 ABTB2Q8N961 1025 aa18.39■□□□□ 0.54
PFKL-202ENST00000397961 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.54
PFKL-202ENST00000397961 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
PFKL-202ENST00000397961 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
PFKL-202ENST00000397961 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.53
PFKL-202ENST00000397961 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
PFKL-202ENST00000397961 CALD1Q05682 793 aaKnown RBP18.38■□□□□ 0.53
PFKL-202ENST00000397961 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
PFKL-202ENST00000397961 CAMSAP1Q5T5Y3 1602 aa18.38■□□□□ 0.53
PFKL-202ENST00000397961 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
PFKL-202ENST00000397961 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
PFKL-202ENST00000397961 HECW2Q9P2P5 1572 aa18.37■□□□□ 0.53
PFKL-202ENST00000397961 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
PFKL-202ENST00000397961 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
PFKL-202ENST00000397961 SSFA2P28290 1259 aa18.36■□□□□ 0.53
PFKL-202ENST00000397961 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
PFKL-202ENST00000397961 MPNDQ8N594 471 aa18.36■□□□□ 0.53
PFKL-202ENST00000397961 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
PFKL-202ENST00000397961 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
PFKL-202ENST00000397961 NSD2O96028 1365 aa18.36■□□□□ 0.53
PFKL-202ENST00000397961 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
PFKL-202ENST00000397961 TTC21BQ7Z4L5 1316 aa18.35■□□□□ 0.53
PFKL-202ENST00000397961 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
PFKL-202ENST00000397961 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
PFKL-202ENST00000397961 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
PFKL-202ENST00000397961 DEPDC5O75140 1603 aa18.34■□□□□ 0.53
PFKL-202ENST00000397961 ZMYM3Q14202 1370 aa18.34■□□□□ 0.53
PFKL-202ENST00000397961 TNPO1Q92973 898 aaKnown RBP18.34■□□□□ 0.53
PFKL-202ENST00000397961 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.52
PFKL-202ENST00000397961 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.52
PFKL-202ENST00000397961 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
PFKL-202ENST00000397961 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
PFKL-202ENST00000397961 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
PFKL-202ENST00000397961 PKP1Q13835 747 aa18.32■□□□□ 0.52
PFKL-202ENST00000397961 ANTXR1Q9H6X2 564 aa18.32■□□□□ 0.52
PFKL-202ENST00000397961 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
PFKL-202ENST00000397961 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
PFKL-202ENST00000397961 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
PFKL-202ENST00000397961 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
PFKL-202ENST00000397961 NAP1L5Q96NT1 182 aaPredicted RBP18.31■□□□□ 0.52
PFKL-202ENST00000397961 UPF3BQ9BZI7 483 aaKnown RBP18.31■□□□□ 0.52
PFKL-202ENST00000397961 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
PFKL-202ENST00000397961 SIGLEC1Q9BZZ2 1709 aa18.31■□□□□ 0.52
PFKL-202ENST00000397961 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
PFKL-202ENST00000397961 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
PFKL-202ENST00000397961 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
PFKL-202ENST00000397961 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
PFKL-202ENST00000397961 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
PFKL-202ENST00000397961 CDC45O75419 566 aa18.3■□□□□ 0.52
PFKL-202ENST00000397961 NRXN1Q9ULB1 1477 aa18.3■□□□□ 0.52
PFKL-202ENST00000397961 EYA1Q99502 592 aa18.3■□□□□ 0.52
PFKL-202ENST00000397961 PTPRMP28827 1452 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
PFKL-202ENST00000397961 LRRC59Q96AG4 307 aaKnown RBP18.29■□□□□ 0.52
PFKL-202ENST00000397961 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■□□ 17.4
PFKL-202ENST00000397961 SDSP20132 328 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 PLEKHM2Q8IWE5 1019 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
PFKL-202ENST00000397961 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
PFKL-202ENST00000397961 ZGPATQ8N5A5 531 aaKnown RBP18.28■□□□□ 0.52
PFKL-202ENST00000397961 ARID3AQ99856 593 aa18.28■□□□□ 0.52
PFKL-202ENST00000397961 MSH6P52701 1360 aa18.28■□□□□ 0.52
PFKL-202ENST00000397961 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
PFKL-202ENST00000397961 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
PFKL-202ENST00000397961 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
PFKL-202ENST00000397961 IL16Q14005 1332 aa18.27■□□□□ 0.51
PFKL-202ENST00000397961 NEK4P51957 841 aa18.27■□□□□ 0.51
PFKL-202ENST00000397961 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.51
PFKL-202ENST00000397961 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 KCNA6P17658 529 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 SHPRHQ149N8 1683 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
PFKL-202ENST00000397961 LRRFIP2Q9Y608 721 aaKnown RBP18.26■□□□□ 0.51
PFKL-202ENST00000397961 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
PFKL-202ENST00000397961 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
PFKL-202ENST00000397961 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms