RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 RIMS1Q86UR5 1692 aaKnown RBP16.45■□□□□ 0.22
LST1-212ENST00000396101 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
LST1-212ENST00000396101 CLCN1P35523 988 aa16.44■□□□□ 0.22
LST1-212ENST00000396101 AMHR2Q16671 573 aa16.44■□□□□ 0.22
LST1-212ENST00000396101 RRP7BPQ9NSQ0 103 aa16.44■□□□□ 0.22
LST1-212ENST00000396101 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
LST1-212ENST00000396101 ABCC5O15440 1437 aa16.44■□□□□ 0.22
LST1-212ENST00000396101 MORN1Q5T089 497 aa16.43■□□□□ 0.22
LST1-212ENST00000396101 PTPN23Q9H3S7 1636 aa16.42■□□□□ 0.22
LST1-212ENST00000396101 NR1I2O75469 434 aa16.41■□□□□ 0.22
LST1-212ENST00000396101 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
LST1-212ENST00000396101 FER1L4A9Z1Z3 1794 aa16.39■□□□□ 0.21
LST1-212ENST00000396101 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
LST1-212ENST00000396101 HSPA2P54652 639 aa16.39■□□□□ 0.21
LST1-212ENST00000396101 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
LST1-212ENST00000396101 TCOF1Q13428 1488 aaKnown RBP16.39■□□□□ 0.21
LST1-212ENST00000396101 ZMYM3Q14202 1370 aa16.38■□□□□ 0.21
LST1-212ENST00000396101 DAPK1P53355 1430 aa16.38■□□□□ 0.21
LST1-212ENST00000396101 ITGAEP38570 1179 aa16.38■□□□□ 0.21
LST1-212ENST00000396101 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
LST1-212ENST00000396101 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
LST1-212ENST00000396101 ADH1BP00325 375 aa16.36■□□□□ 0.21
LST1-212ENST00000396101 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
LST1-212ENST00000396101 TRIM66O15016 1216 aa16.35■□□□□ 0.21
LST1-212ENST00000396101 THAP11Q96EK4 314 aa16.35■□□□□ 0.21
LST1-212ENST00000396101 KIF15Q9NS87 1388 aa16.35■□□□□ 0.21
LST1-212ENST00000396101 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
LST1-212ENST00000396101 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
LST1-212ENST00000396101 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
LST1-212ENST00000396101 AK7Q96M32 723 aa16.33■□□□□ 0.2
LST1-212ENST00000396101 KDM4AO75164 1064 aa16.32■□□□□ 0.2
LST1-212ENST00000396101 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
LST1-212ENST00000396101 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
LST1-212ENST00000396101 PTPRKQ15262 1439 aa16.31■□□□□ 0.2
LST1-212ENST00000396101 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
LST1-212ENST00000396101 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
LST1-212ENST00000396101 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
LST1-212ENST00000396101 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
LST1-212ENST00000396101 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
LST1-212ENST00000396101 PARP9Q8IXQ6 854 aa16.3■□□□□ 0.2
LST1-212ENST00000396101 RNF223E7ERA6 249 aa16.29■□□□□ 0.2
LST1-212ENST00000396101 S1PR4O95977 384 aa16.29■□□□□ 0.2
LST1-212ENST00000396101 GGCXP38435 758 aa16.29■□□□□ 0.2
LST1-212ENST00000396101 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
LST1-212ENST00000396101 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
LST1-212ENST00000396101 C3P01024 1663 aa16.28■□□□□ 0.2
LST1-212ENST00000396101 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
LST1-212ENST00000396101 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
LST1-212ENST00000396101 SPSB2Q99619 263 aa16.28■□□□□ 0.2
LST1-212ENST00000396101 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
LST1-212ENST00000396101 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
LST1-212ENST00000396101 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
LST1-212ENST00000396101 USP46P62068 366 aa16.27■□□□□ 0.2
LST1-212ENST00000396101 HOXA2O43364 376 aa16.26■□□□□ 0.19
LST1-212ENST00000396101 HLA-CQ95604 372 aa16.26■□□□□ 0.19
LST1-212ENST00000396101 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
LST1-212ENST00000396101 BRICD5Q6PL45 260 aa16.25■□□□□ 0.19
LST1-212ENST00000396101 RNF19BQ6ZMZ0 732 aa16.25■□□□□ 0.19
LST1-212ENST00000396101 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
LST1-212ENST00000396101 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
LST1-212ENST00000396101 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
LST1-212ENST00000396101 PRKD2Q9BZL6 878 aa16.24■□□□□ 0.19
LST1-212ENST00000396101 SLC6A16Q9GZN6 736 aa16.24■□□□□ 0.19
LST1-212ENST00000396101 NPATQ14207 1427 aa16.23■□□□□ 0.19
LST1-212ENST00000396101 FAM160A2Q8N612 972 aaPredicted RBP16.23■□□□□ 0.19
LST1-212ENST00000396101 V9GY48 417 aaPredicted RBP16.23■□□□□ 0.19
LST1-212ENST00000396101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
LST1-212ENST00000396101 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
LST1-212ENST00000396101 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
LST1-212ENST00000396101 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
LST1-212ENST00000396101 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
LST1-212ENST00000396101 PPEF1O14829 653 aaPredicted RBP16.21■□□□□ 0.19
LST1-212ENST00000396101 MROH2AA6NES4 1674 aa16.21■□□□□ 0.18
LST1-212ENST00000396101 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
LST1-212ENST00000396101 ANKRD50Q9ULJ7 1429 aa16.2■□□□□ 0.18
LST1-212ENST00000396101 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
LST1-212ENST00000396101 MS4A1P11836 297 aa16.2■□□□□ 0.18
LST1-212ENST00000396101 PDE4DQ08499 809 aa16.2■□□□□ 0.18
LST1-212ENST00000396101 ABCC3O15438 1527 aa16.19■□□□□ 0.18
LST1-212ENST00000396101 ROCK1Q13464 1354 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 KANK1Q14678 1352 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 TNRQ92752 1358 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 GUCA2AQ02747 115 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
LST1-212ENST00000396101 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
LST1-212ENST00000396101 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
LST1-212ENST00000396101 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
LST1-212ENST00000396101 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
LST1-212ENST00000396101 PRDM9Q9NQV7 894 aa16.17■□□□□ 0.18
LST1-212ENST00000396101 PZPP20742 1482 aa16.16■□□□□ 0.18
LST1-212ENST00000396101 Q3C1V9 767 aa16.16■□□□□ 0.18
LST1-212ENST00000396101 PLA2G2CQ5R387 149 aa16.15■□□□□ 0.18
LST1-212ENST00000396101 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
LST1-212ENST00000396101 CFAP65Q6ZU64 1925 aaKnown RBP16.14■□□□□ 0.17
LST1-212ENST00000396101 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
LST1-212ENST00000396101 IRX2Q9BZI1 471 aaPredicted RBP16.13■□□□□ 0.17
LST1-212ENST00000396101 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
LST1-212ENST00000396101 PCDHGC3Q9UN70 934 aa16.11■□□□□ 0.17
LST1-212ENST00000396101 CEP152O94986 1710 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms