RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
NFKB1-202ENST00000394820 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
NFKB1-202ENST00000394820 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
NFKB1-202ENST00000394820 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
NFKB1-202ENST00000394820 CHAMP1Q96JM3 812 aa16.31■□□□□ 0.2
NFKB1-202ENST00000394820 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
NFKB1-202ENST00000394820 ZMYND15Q9H091 742 aa16.3■□□□□ 0.2
NFKB1-202ENST00000394820 MYOM1P52179 1685 aa16.3■□□□□ 0.2
NFKB1-202ENST00000394820 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
NFKB1-202ENST00000394820 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
NFKB1-202ENST00000394820 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
NFKB1-202ENST00000394820 FCHSD2O94868 740 aa16.29■□□□□ 0.2
NFKB1-202ENST00000394820 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
NFKB1-202ENST00000394820 CCDC61Q9Y6R9 512 aa16.29■□□□□ 0.2
NFKB1-202ENST00000394820 NEO1Q92859 1461 aa16.29■□□□□ 0.2
NFKB1-202ENST00000394820 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
NFKB1-202ENST00000394820 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 CHD1LQ86WJ1 897 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 GLI2P10070 1586 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 MCM10Q7L590 875 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
NFKB1-202ENST00000394820 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
NFKB1-202ENST00000394820 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
NFKB1-202ENST00000394820 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
NFKB1-202ENST00000394820 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
NFKB1-202ENST00000394820 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
NFKB1-202ENST00000394820 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
NFKB1-202ENST00000394820 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.2
NFKB1-202ENST00000394820 ADGRB1O14514 1584 aa16.27■□□□□ 0.2
NFKB1-202ENST00000394820 NFE2L2Q16236 605 aa16.27■□□□□ 0.19
NFKB1-202ENST00000394820 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
NFKB1-202ENST00000394820 NSD2O96028 1365 aa16.26■□□□□ 0.19
NFKB1-202ENST00000394820 KCNJ4P48050 445 aa16.26■□□□□ 0.19
NFKB1-202ENST00000394820 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
NFKB1-202ENST00000394820 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
NFKB1-202ENST00000394820 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
NFKB1-202ENST00000394820 LMTK2Q8IWU2 1503 aa16.25■□□□□ 0.19
NFKB1-202ENST00000394820 NAP1L2Q9ULW6 460 aaPredicted RBP16.25■□□□□ 0.19
NFKB1-202ENST00000394820 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
NFKB1-202ENST00000394820 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
NFKB1-202ENST00000394820 METP08581 1390 aa16.25■□□□□ 0.19
NFKB1-202ENST00000394820 NEK4P51957 841 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 AMPHP49418 695 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 ST18O60284 1047 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
NFKB1-202ENST00000394820 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 GNAI1P63096 354 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 K7ELQ4 463 aaPredicted RBP16.23■□□□□ 0.19
NFKB1-202ENST00000394820 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
NFKB1-202ENST00000394820 USP19O94966 1318 aa16.23■□□□□ 0.19
NFKB1-202ENST00000394820 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
NFKB1-202ENST00000394820 PUS7Q96PZ0 661 aaKnown RBP16.22■□□□□ 0.19
NFKB1-202ENST00000394820 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
NFKB1-202ENST00000394820 SYCE3A1L190 88 aa16.22■□□□□ 0.19
NFKB1-202ENST00000394820 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
NFKB1-202ENST00000394820 NEXMIFQ5QGS0 1516 aa16.21■□□□□ 0.19
NFKB1-202ENST00000394820 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
NFKB1-202ENST00000394820 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
NFKB1-202ENST00000394820 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
NFKB1-202ENST00000394820 ZMYM3Q14202 1370 aa16.21■□□□□ 0.19
NFKB1-202ENST00000394820 CAMSAP1Q5T5Y3 1602 aa16.21■□□□□ 0.19
NFKB1-202ENST00000394820 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
NFKB1-202ENST00000394820 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.18
NFKB1-202ENST00000394820 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.18
NFKB1-202ENST00000394820 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
NFKB1-202ENST00000394820 TBC1D9Q6ZT07 1266 aa16.2■□□□□ 0.18
NFKB1-202ENST00000394820 ACEP12821 1306 aa16.2■□□□□ 0.18
NFKB1-202ENST00000394820 KIAA1210Q9ULL0 1709 aa16.19■□□□□ 0.18
NFKB1-202ENST00000394820 FOXO3O43524 673 aa16.19■□□□□ 0.18
NFKB1-202ENST00000394820 CDC45O75419 566 aa16.19■□□□□ 0.18
NFKB1-202ENST00000394820 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 SETBP1Q9Y6X0 1596 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 VAMP4O75379 141 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 LTKP29376 864 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 NLRP6P59044 892 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 SIGLEC1Q9BZZ2 1709 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 IL13P35225 146 aa16.18■□□□□ 0.18
NFKB1-202ENST00000394820 PPLO60437 1756 aa16.17■□□□□ 0.18
NFKB1-202ENST00000394820 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
NFKB1-202ENST00000394820 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
NFKB1-202ENST00000394820 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
NFKB1-202ENST00000394820 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
NFKB1-202ENST00000394820 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
NFKB1-202ENST00000394820 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
NFKB1-202ENST00000394820 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
NFKB1-202ENST00000394820 FBXW7Q969H0 707 aa16.16■□□□□ 0.18
NFKB1-202ENST00000394820 EXOC6BQ9Y2D4 811 aa16.16■□□□□ 0.18
NFKB1-202ENST00000394820 ZBTB40Q9NUA8 1239 aa16.16■□□□□ 0.18
NFKB1-202ENST00000394820 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
NFKB1-202ENST00000394820 CLCN1P35523 988 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms