RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 GTPBP4Q9BZE4 634 aaKnown RBP27.1■■□□□ 1.93
CLDND1-202ENST00000394180 MED14O60244 1454 aa27.09■■□□□ 1.93
CLDND1-202ENST00000394180 KIF20AO95235 890 aa27.09■■□□□ 1.93
CLDND1-202ENST00000394180 CDCA8Q53HL2 280 aa27.09■■□□□ 1.93
CLDND1-202ENST00000394180 PANK1Q8TE04 598 aa27.09■■□□□ 1.93
CLDND1-202ENST00000394180 PCDHB15Q9Y5E8 787 aa27.09■■□□□ 1.93
CLDND1-202ENST00000394180 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CLDND1-202ENST00000394180 WAPLQ7Z5K2 1190 aa27.08■■□□□ 1.92
CLDND1-202ENST00000394180 TNNT2P45379 298 aaPredicted RBP27.07■■□□□ 1.92
CLDND1-202ENST00000394180 HSPA2P54652 639 aa27.07■■□□□ 1.92
CLDND1-202ENST00000394180 NCKAP5LQ9HCH0 1330 aa27.06■■□□□ 1.92
CLDND1-202ENST00000394180 APAF1O14727 1248 aa27.05■■□□□ 1.92
CLDND1-202ENST00000394180 ZKSCAN5Q9Y2L8 839 aa27.05■■□□□ 1.92
CLDND1-202ENST00000394180 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
CLDND1-202ENST00000394180 ABCC11Q96J66 1382 aa27.05■■□□□ 1.92
CLDND1-202ENST00000394180 SBNO2Q9Y2G9 1366 aa27.04■■□□□ 1.92
CLDND1-202ENST00000394180 NCBP3Q53F19 620 aaKnown RBP27.04■■□□□ 1.92
CLDND1-202ENST00000394180 PTPRUQ92729 1446 aa27.03■■□□□ 1.92
CLDND1-202ENST00000394180 MFAP1P55081 439 aaKnown RBP27.02■■□□□ 1.92
CLDND1-202ENST00000394180 MINK1Q8N4C8 1332 aaPredicted RBP27.02■■□□□ 1.92
CLDND1-202ENST00000394180 RARSP54136 660 aaKnown RBP27.01■■□□□ 1.91
CLDND1-202ENST00000394180 ZSCAN20P17040 1043 aaPredicted RBP27.01■■□□□ 1.91
CLDND1-202ENST00000394180 HDAC1Q13547 482 aaPredicted RBP27■■□□□ 1.91
CLDND1-202ENST00000394180 HSP90AB1P08238 724 aaKnown RBP27■■□□□ 1.91
CLDND1-202ENST00000394180 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.99■■□□□ 1.91
CLDND1-202ENST00000394180 LETM1O95202 739 aaPredicted RBP26.98■■□□□ 1.91
CLDND1-202ENST00000394180 AMOTL2Q9Y2J4 779 aa26.98■■□□□ 1.91
CLDND1-202ENST00000394180 DLC1Q96QB1 1528 aa26.98■■□□□ 1.91
CLDND1-202ENST00000394180 ROBO2Q9HCK4 1378 aa26.98■■□□□ 1.91
CLDND1-202ENST00000394180 NPHP4O75161 1426 aaPredicted RBP26.97■■□□□ 1.91
CLDND1-202ENST00000394180 CCDC39Q9UFE4 941 aa26.97■■□□□ 1.91
CLDND1-202ENST00000394180 LMTK3Q96Q04 1460 aa26.97■■□□□ 1.91
CLDND1-202ENST00000394180 TAF3Q5VWG9 929 aa26.97■■□□□ 1.91
CLDND1-202ENST00000394180 TECPR2O15040 1411 aa26.96■■□□□ 1.91
CLDND1-202ENST00000394180 PDE4CQ08493 712 aa26.96■■□□□ 1.91
CLDND1-202ENST00000394180 DIP2AQ14689 1571 aa26.96■■□□□ 1.91
CLDND1-202ENST00000394180 WWC1Q8IX03 1113 aa26.96■■□□□ 1.91
CLDND1-202ENST00000394180 TULP4Q9NRJ4 1543 aa26.95■■□□□ 1.91
CLDND1-202ENST00000394180 KIF16BQ96L93 1317 aa26.94■■□□□ 1.9
CLDND1-202ENST00000394180 DDX49Q9Y6V7 483 aaKnown RBP26.94■■□□□ 1.9
CLDND1-202ENST00000394180 KNDC1Q76NI1 1749 aa26.94■■□□□ 1.9
CLDND1-202ENST00000394180 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
CLDND1-202ENST00000394180 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
CLDND1-202ENST00000394180 EVC2Q86UK5 1308 aa26.93■■□□□ 1.9
CLDND1-202ENST00000394180 CPS1P31327 1500 aa26.93■■□□□ 1.9
CLDND1-202ENST00000394180 MVPQ14764 893 aaKnown RBP26.93■■□□□ 1.9
CLDND1-202ENST00000394180 PRIMPOLQ96LW4 560 aa26.92■■□□□ 1.9
CLDND1-202ENST00000394180 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-202ENST00000394180 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-202ENST00000394180 CT47B1P0C2W7 299 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-202ENST00000394180 KCNA6P17658 529 aa26.92■■□□□ 1.9
CLDND1-202ENST00000394180 CCDC146Q8IYE0 955 aa26.92■■□□□ 1.9
CLDND1-202ENST00000394180 GTF2F1P35269 517 aaKnown RBP eCLIP26.91■■□□□ 1.9
CLDND1-202ENST00000394180 MYRIPQ8NFW9 859 aa26.91■■□□□ 1.9
CLDND1-202ENST00000394180 K7ELQ4 463 aaPredicted RBP26.9■■□□□ 1.9
CLDND1-202ENST00000394180 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
CLDND1-202ENST00000394180 HMGN5P82970 282 aaKnown RBP26.9■■□□□ 1.9
CLDND1-202ENST00000394180 MYOM1P52179 1685 aa26.9■■□□□ 1.9
CLDND1-202ENST00000394180 BAG4O95429 457 aaKnown RBP26.89■■□□□ 1.9
CLDND1-202ENST00000394180 SRPK2P78362 688 aaKnown RBP26.89■■□□□ 1.89
CLDND1-202ENST00000394180 SIRT1Q96EB6 747 aa26.89■■□□□ 1.89
CLDND1-202ENST00000394180 XPCQ01831 940 aaPredicted RBP26.88■■□□□ 1.89
CLDND1-202ENST00000394180 RLBP1P12271 317 aa26.88■■□□□ 1.89
CLDND1-202ENST00000394180 CCDC27Q2M243 656 aa26.88■■□□□ 1.89
CLDND1-202ENST00000394180 DMRT2Q9Y5R5 561 aa26.88■■□□□ 1.89
CLDND1-202ENST00000394180 ZHX1Q9UKY1 873 aaPredicted RBP26.87■■□□□ 1.89
CLDND1-202ENST00000394180 CDK19Q9BWU1 502 aa26.86■■□□□ 1.89
CLDND1-202ENST00000394180 NUCB2P80303 420 aa26.86■■□□□ 1.89
CLDND1-202ENST00000394180 PIK3R4Q99570 1358 aa26.85■■□□□ 1.89
CLDND1-202ENST00000394180 XRN1Q8IZH2 1706 aaKnown RBP26.85■■□□□ 1.89
CLDND1-202ENST00000394180 IQSEC2Q5JU85 1478 aa26.85■■□□□ 1.89
CLDND1-202ENST00000394180 ZSCAN23Q3MJ62 389 aa26.85■■□□□ 1.89
CLDND1-202ENST00000394180 RBM33Q96EV2 1170 aaKnown RBP26.85■■□□□ 1.89
CLDND1-202ENST00000394180 SLC12A5Q9H2X9 1139 aa26.85■■□□□ 1.89
CLDND1-202ENST00000394180 PPP4R3BQ5MIZ7 849 aa26.84■■□□□ 1.89
CLDND1-202ENST00000394180 CHD2O14647 1828 aaKnown RBP26.83■■□□□ 1.89
CLDND1-202ENST00000394180 PTCH1Q13635 1447 aa26.83■■□□□ 1.88
CLDND1-202ENST00000394180 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.82■■□□□ 1.88
CLDND1-202ENST00000394180 KIF2CQ99661 725 aa26.82■■□□□ 1.88
CLDND1-202ENST00000394180 RBSNQ9H1K0 784 aa26.81■■□□□ 1.88
CLDND1-202ENST00000394180 ZKSCAN2Q63HK3 967 aa26.81■■□□□ 1.88
CLDND1-202ENST00000394180 WASLO00401 505 aaPredicted RBP26.8■■□□□ 1.88
CLDND1-202ENST00000394180 SSFA2P28290 1259 aa26.8■■□□□ 1.88
CLDND1-202ENST00000394180 BMP2KLQ5H9B9 411 aa26.8■■□□□ 1.88
CLDND1-202ENST00000394180 KIAA2012Q0VF49 1180 aa26.78■■□□□ 1.88
CLDND1-202ENST00000394180 DZIP1LQ8IYY4 767 aaKnown RBP26.78■■□□□ 1.88
CLDND1-202ENST00000394180 DDX19BQ9UMR2 479 aa26.78■■□□□ 1.88
CLDND1-202ENST00000394180 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
CLDND1-202ENST00000394180 BBXQ8WY36 941 aaPredicted RBP26.78■■□□□ 1.88
CLDND1-202ENST00000394180 CFAP44Q96MT7 982 aa26.78■■□□□ 1.88
CLDND1-202ENST00000394180 CYP2E1P05181 493 aaPredicted RBP26.77■■□□□ 1.88
CLDND1-202ENST00000394180 LMBRD1Q9NUN5 540 aa26.77■■□□□ 1.88
CLDND1-202ENST00000394180 RUNDC1Q96C34 613 aa26.77■■□□□ 1.88
CLDND1-202ENST00000394180 PUS7Q96PZ0 661 aaKnown RBP26.77■■□□□ 1.88
CLDND1-202ENST00000394180 NUTM2FA1L443 756 aa26.76■■□□□ 1.87
CLDND1-202ENST00000394180 LRSAM1Q6UWE0 723 aa26.76■■□□□ 1.87
CLDND1-202ENST00000394180 PRDM10Q9NQV6 1147 aa26.76■■□□□ 1.87
CLDND1-202ENST00000394180 GTF2E1P29083 439 aaPredicted RBP26.75■■□□□ 1.87
CLDND1-202ENST00000394180 CARD14Q9BXL6 1004 aa26.75■■□□□ 1.87
CLDND1-202ENST00000394180 CWC22Q9HCG8 908 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms