RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TMX1Q9H3N1 280 aa20.37■□□□□ 0.85
TRAF3IP1-202ENST00000391993 TIGD1Q96MW7 591 aa20.37■□□□□ 0.85
TRAF3IP1-202ENST00000391993 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
TRAF3IP1-202ENST00000391993 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
TRAF3IP1-202ENST00000391993 MNS1Q8NEH6 495 aa20.36■□□□□ 0.85
TRAF3IP1-202ENST00000391993 C9orf84Q5VXU9 1444 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 TAF3Q5VWG9 929 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CCDC9Q9Y3X0 531 aaKnown RBP20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CCDC183Q5T5S1 534 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CARD14Q9BXL6 1004 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 SDSP20132 328 aa20.35■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CFAP43Q8NDM7 1665 aa20.34■□□□□ 0.85
TRAF3IP1-202ENST00000391993 PIBF1Q8WXW3 757 aa20.34■□□□□ 0.85
TRAF3IP1-202ENST00000391993 IL1RAPL2Q9NP60 686 aa20.34■□□□□ 0.85
TRAF3IP1-202ENST00000391993 ZBTB40Q9NUA8 1239 aa20.34■□□□□ 0.85
TRAF3IP1-202ENST00000391993 ZNF521Q96K83 1311 aa20.34■□□□□ 0.85
TRAF3IP1-202ENST00000391993 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
TRAF3IP1-202ENST00000391993 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.84
TRAF3IP1-202ENST00000391993 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TNMDQ9H2S6 317 aa20.33■□□□□ 0.84
TRAF3IP1-202ENST00000391993 H3BQV1 296 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 APPP05067 770 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 IFFO2Q5TF58 517 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 STK3Q13188 491 aa20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 DENND4BO75064 1496 aaPredicted RBP20.32■□□□□ 0.84
TRAF3IP1-202ENST00000391993 ZNF692Q9BU19 519 aaPredicted RBP20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TFIP11Q9UBB9 837 aaKnown RBP20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 CUL7Q14999 1698 aa20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 ZSCAN20P17040 1043 aaPredicted RBP20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 GTF3C6Q969F1 213 aa20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
TRAF3IP1-202ENST00000391993 NAA30Q147X3 362 aaPredicted RBP20.3■□□□□ 0.84
TRAF3IP1-202ENST00000391993 PTPN14Q15678 1187 aa20.3■□□□□ 0.84
TRAF3IP1-202ENST00000391993 BCORL1Q5H9F3 1711 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 GPS2Q13227 327 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TPM3P06753 285 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 KRT222Q8N1A0 295 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 PZPP20742 1482 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 CALCOCO1Q9P1Z2 691 aa20.29■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
TRAF3IP1-202ENST00000391993 NUP62CLQ9H1M0 184 aa20.28■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
TRAF3IP1-202ENST00000391993 MCM2P49736 904 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 GNAI1P63096 354 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.84
TRAF3IP1-202ENST00000391993 STAC3Q96MF2 364 aa20.27■□□□□ 0.83
TRAF3IP1-202ENST00000391993 SMC2O95347 1197 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 LRMPQ12912 555 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 LUZP1Q86V48 1076 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 USP26Q9BXU7 913 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CLIP2Q9UDT6 1046 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CARMIL2Q6F5E8 1435 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 PPFIA3O75145 1194 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 NOL10Q9BSC4 688 aaKnown RBP20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 OGFRQ9NZT2 677 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
TRAF3IP1-202ENST00000391993 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 ARGLU1Q9NWB6 273 aaPredicted RBP20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
TRAF3IP1-202ENST00000391993 LARP1BQ659C4 914 aaKnown RBP20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 GPATCH11Q8N954 259 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 MIS18AQ9NYP9 233 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 F6X3S4 739 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 KDM4AO75164 1064 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 PLEKHM2Q8IWE5 1019 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
TRAF3IP1-202ENST00000391993 SPAG9O60271 1321 aaKnown RBP20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CWC27Q6UX04 472 aaKnown RBP20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 DNM1Q05193 864 aaKnown RBP20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 C10orf67Q8IYJ2 551 aa20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 EVC2Q86UK5 1308 aa20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
TRAF3IP1-202ENST00000391993 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 SDF4Q9BRK5 362 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 HECW1Q76N89 1606 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 KANK1Q14678 1352 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 GOLGA6L1Q8N7Z2 621 aa20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CT47B1P0C2W7 299 aaPredicted RBP20.22■□□□□ 0.83
TRAF3IP1-202ENST00000391993 MX1P20591 662 aa20.21■□□□□ 0.83
TRAF3IP1-202ENST00000391993 AFAP1Q8N556 730 aa20.21■□□□□ 0.83
TRAF3IP1-202ENST00000391993 CPA1P15085 419 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms