RNA–Protein interactions for RNA: ENST00000391111.1

RNU11-3P-201, Transcript of RNA, U11 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU11-3P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-3P-201ENST00000391111 NPAS4Q8IUM7 802 aa3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZSCAN29Q8IWY8 852 aaPredicted RBP3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 SCUBE3Q8IX30 993 aa3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 DEPDC4Q8N2C3 294 aa3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 THAP11Q96EK4 314 aa3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZFRQ96KR1 1074 aaKnown RBP3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 PUS7Q96PZ0 661 aaKnown RBP3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 RBM19Q9Y4C8 960 aaKnown RBP3.14□□□□□ -1.91
RNU11-3P-201ENST00000391111 M0R2N6 131 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 DKK1O94907 266 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 HSP90B1P14625 803 aaKnown RBP3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 TCF3P15923 654 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 SERPINB4P48594 390 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 PSEN2P49810 448 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 PUS10Q3MIT2 529 aaKnown RBP3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 MSS51Q4VC12 460 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 BLOC1S3Q6QNY0 202 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 GIPC2Q8TF65 315 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 DRC1Q96MC2 740 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 ASB16Q96NS5 453 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 CXXC1Q9P0U4 656 aaPredicted RBP3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 BIN2Q9UBW5 565 aaPredicted RBP3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 PCDHB9Q9Y5E1 797 aa3.13□□□□□ -1.91
RNU11-3P-201ENST00000391111 PTCD1O75127 700 aaKnown RBP3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 DXOO77932 396 aaKnown RBP3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 CCNYL3P0C7X3 344 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 CTHP32929 405 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 ITGAEP38570 1179 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 MMP16P51512 607 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 PPP4CP60510 307 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 CLDN10P78369 228 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 FGD1P98174 961 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 FKBP4Q02790 459 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 USP4Q13107 963 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 CCDC102BQ68D86 513 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 RNF19BQ6ZMZ0 732 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 FBXO33Q7Z6M2 555 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZBTB33Q86T24 672 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZNF687Q8N1G0 1237 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 COL26A1Q96A83 441 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 LRCH3Q96II8 777 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 DCTN4Q9UJW0 460 aa3.12□□□□□ -1.91
RNU11-3P-201ENST00000391111 C21orf2O43822 256 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 NPR3P17342 541 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 GTF2IP78347 998 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 ECM1Q16610 540 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 OCLNQ16625 522 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 POTEEQ6S8J3 1075 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 SH3BP5LQ7L8J4 393 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 DZIP3Q86Y13 1208 aaKnown RBP3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 GLYCTKQ8IVS8 523 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 SEPT12Q8IYM1 358 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 MRPL50Q8N5N7 158 aaKnown RBP3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 ADAM32Q8TC27 787 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 TRIM52Q96A61 297 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 CITED4Q96RK1 184 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 NUDT12Q9BQG2 462 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 OCSTAMPQ9BR26 566 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 ARHGAP9Q9BRR9 750 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 MAP10Q9P2G4 905 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 CDV3Q9UKY7 258 aaKnown RBP3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 DOLKQ9UPQ8 538 aa3.11□□□□□ -1.91
RNU11-3P-201ENST00000391111 POTEB2H3BUK9 544 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 RNF40O75150 1001 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 WEE1P30291 646 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZC3H6P61129 1189 aaKnown RBP3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 TSGA10IPQ3SY00 556 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 DMRTA1Q5VZB9 504 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 RGL4Q8IZJ4 473 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 GAS2L2Q8NHY3 880 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 SREK1Q8WXA9 508 aaKnown RBP3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 PCDHB3Q9Y5E6 796 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 PCDHGA11Q9Y5H2 935 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 ERBB3P21860 1342 aa3.1□□□□□ -1.91
RNU11-3P-201ENST00000391111 SOWAHBA6NEL2 793 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 ESPNB1AK53 854 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 PRMT3O60678 531 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 FAM13AO94988 1023 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 ABL1P00519 1130 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 MAPK1P28482 360 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 EAPPQ56P03 285 aaPredicted RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 SH3RF1Q7Z6J0 888 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 FAM160A2Q8N612 972 aaPredicted RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 GTF3C2Q8WUA4 911 aaPredicted RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 UBXN4Q92575 508 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 ZNF594Q96JF6 807 aaPredicted RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 PRIMPOLQ96LW4 560 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 CCDC85AQ96PX6 553 aaPredicted RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 HINFPQ9BQA5 517 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 RBCK1Q9BYM8 510 aa3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 TSR3Q9UJK0 312 aaKnown RBP3.09□□□□□ -1.91
RNU11-3P-201ENST00000391111 SFI1A8K8P3 1242 aa3.08□□□□□ -1.92
RNU11-3P-201ENST00000391111 H3BRB1 525 aa3.08□□□□□ -1.92
RNU11-3P-201ENST00000391111 SCAMP3O14828 347 aaKnown RBP3.08□□□□□ -1.92
RNU11-3P-201ENST00000391111 FOXO3O43524 673 aa3.08□□□□□ -1.92
RNU11-3P-201ENST00000391111 GIGYF1O75420 1035 aaPredicted RBP3.08□□□□□ -1.92
RNU11-3P-201ENST00000391111 IGFBP4P22692 258 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms