RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
TRAPPC9-201ENST00000389328 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 TEFQ10587 303 aa15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 ZNF830Q96NB3 372 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 RNF20Q5VTR2 975 aa15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 TSHZ3Q63HK5 1081 aa15.77■□□□□ 0.12
TRAPPC9-201ENST00000389328 GORABQ5T7V8 394 aa15.77■□□□□ 0.11
TRAPPC9-201ENST00000389328 ABCC11Q96J66 1382 aa15.77■□□□□ 0.11
TRAPPC9-201ENST00000389328 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 CEBPZQ03701 1054 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 C16orf71Q8IYS4 520 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 PDCL2Q8N4E4 241 aa15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 KIF14Q15058 1648 aa15.76■□□□□ 0.11
TRAPPC9-201ENST00000389328 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 OFD1O75665 1012 aa15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 FAM135AQ9P2D6 1515 aa15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 MCM10Q7L590 875 aa15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-201ENST00000389328 F6X3S4 739 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 CCT4P50991 539 aaKnown RBP15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 FERMT3Q86UX7 667 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 G3BP1Q13283 466 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 TTC22Q5TAA0 569 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 EMILIN1Q9Y6C2 1016 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 LRSAM1Q6UWE0 723 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
TRAPPC9-201ENST00000389328 SDSP20132 328 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 STK3Q13188 491 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 CAMK4Q16566 473 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 CCDC112Q8NEF3 446 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 TNMDQ9H2S6 317 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 FAM83GA6ND36 823 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 WDR62O43379 1518 aa15.73■□□□□ 0.11
TRAPPC9-201ENST00000389328 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 MX1P20591 662 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 MBIPQ9NS73 344 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 ADCY5O95622 1261 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 TMX3Q96JJ7 454 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 CYP46A1Q9Y6A2 500 aa15.72■□□□□ 0.11
TRAPPC9-201ENST00000389328 MCM5P33992 734 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 KRT85P78386 507 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 GAS2L3Q86XJ1 694 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 A2MP01023 1474 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 NUP160Q12769 1436 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 CCDC183Q5T5S1 534 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 TXNDC2Q86VQ3 553 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 JAKMIP1Q96N16 626 aaKnown RBP15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 RBSNQ9H1K0 784 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 ANTXR1Q9H6X2 564 aa15.71■□□□□ 0.11
TRAPPC9-201ENST00000389328 SPDYE4A6NLX3 237 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 PDCP20941 246 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 ATAD2Q6PL18 1390 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 NOS1P29475 1434 aa15.7■□□□□ 0.1
TRAPPC9-201ENST00000389328 INSRP06213 1382 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 AIMP1Q12904 312 aaKnown RBP15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 MNS1Q8NEH6 495 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 IL16Q14005 1332 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 CASTP20810 708 aaKnown RBP15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 PSMA5P28066 241 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 ATP10BO94823 1461 aa15.69■□□□□ 0.1
TRAPPC9-201ENST00000389328 SRGAP3O43295 1099 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 HDGFL1Q5TGJ6 251 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 PDRG1Q9NUG6 133 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 WAPLQ7Z5K2 1190 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 NME9Q86XW9 330 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
TRAPPC9-201ENST00000389328 TRMT2AQ8IZ69 625 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms