RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 NRG2O14511 850 aaPredicted RBP6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 SIAH2O43255 324 aa6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 GFRA3O60609 400 aa6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 FSHRP23945 695 aa6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 KCTD15Q96SI1 283 aaPredicted RBP6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 IRX2Q9BZI1 471 aaPredicted RBP6.62□□□□□ -1.35
RNU6-39P-201ENST00000384344 PKDCCQ504Y2 493 aa6.61□□□□□ -1.35
RNU6-39P-201ENST00000384344 CALR3Q96L12 384 aaKnown RBP6.61□□□□□ -1.35
RNU6-39P-201ENST00000384344 TOR4AQ9NXH8 423 aa6.61□□□□□ -1.35
RNU6-39P-201ENST00000384344 TIMELESSQ9UNS1 1208 aa6.61□□□□□ -1.35
RNU6-39P-201ENST00000384344 FAM187AA6NFU0 413 aa6.6□□□□□ -1.35
RNU6-39P-201ENST00000384344 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
RNU6-39P-201ENST00000384344 TRIM67Q6ZTA4 783 aa6.6□□□□□ -1.35
RNU6-39P-201ENST00000384344 ESF1Q9H501 851 aaKnown RBP6.6□□□□□ -1.35
RNU6-39P-201ENST00000384344 POM121CA8CG34 1229 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 RAB15P59190 212 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 NNTQ13423 1086 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 GLMNQ92990 594 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 ALG2Q9H553 416 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 ZNF777Q9ULD5 760 aaPredicted RBP6.59□□□□□ -1.35
RNU6-39P-201ENST00000384344 J3QL48 77 aa6.58□□□□□ -1.36
RNU6-39P-201ENST00000384344 DGAT1O75907 488 aa6.58□□□□□ -1.36
RNU6-39P-201ENST00000384344 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
RNU6-39P-201ENST00000384344 ESPNB1AK53 854 aa6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 GIGYF1O75420 1035 aaPredicted RBP6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 SMPD1P17405 629 aa6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 GRM5P41594 1212 aa6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 NFATC2IPQ8NCF5 419 aa6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 CCDC97Q96F63 343 aaPredicted RBP6.57□□□□□ -1.36
RNU6-39P-201ENST00000384344 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
RNU6-39P-201ENST00000384344 INTS6LQ5JSJ4 861 aaKnown RBP6.56□□□□□ -1.36
RNU6-39P-201ENST00000384344 DOLKQ9UPQ8 538 aa6.56□□□□□ -1.36
RNU6-39P-201ENST00000384344 MYCP01106 439 aaPredicted RBP6.55□□□□□ -1.36
RNU6-39P-201ENST00000384344 SIRT1Q96EB6 747 aa6.55□□□□□ -1.36
RNU6-39P-201ENST00000384344 PCDHB11Q9Y5F2 797 aa6.55□□□□□ -1.36
RNU6-39P-201ENST00000384344 SKIP12755 728 aa6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 WDR4P57081 412 aaKnown RBP6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 MYT1Q01538 1121 aa6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 CTC1Q2NKJ3 1217 aa6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 SERPINA10Q9UK55 444 aa6.54□□□□□ -1.36
RNU6-39P-201ENST00000384344 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 UPP2O95045 317 aa6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 ZIC2O95409 532 aaPredicted RBP6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 NR3C2P08235 984 aa6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 PLPP7Q8NBV4 271 aa6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 HPS1Q92902 700 aa6.53□□□□□ -1.36
RNU6-39P-201ENST00000384344 ARID3CA6NKF2 412 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 CAPN5O15484 640 aaPredicted RBP6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 ATP9BO43861 1147 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP4Q13107 963 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 EML3Q32P44 896 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 Q6ZNB5 142 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 ADAMTS19Q8TE59 1207 aa6.52□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP17L5A8MUK1 530 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 AXIN1O15169 862 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 AVPP01185 164 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 OXLD1Q5BKU9 147 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 CC2D2BQ6DHV5 1058 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 PHTF2Q8N3S3 785 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 ZNF784Q8NCA9 323 aaPredicted RBP6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 ITPKCQ96DU7 683 aa6.51□□□□□ -1.37
RNU6-39P-201ENST00000384344 TIMP2P16035 220 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 CYP2U1Q7Z449 544 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 CCDC85AQ96PX6 553 aaPredicted RBP6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 CYLDQ9NQC7 956 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 TMPRSS4Q9NRS4 437 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 NOD1Q9Y239 953 aa6.5□□□□□ -1.37
RNU6-39P-201ENST00000384344 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 PIK3CDO00329 1044 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 TBC1D9Q6ZT07 1266 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 TRIM50Q86XT4 487 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 PLEKHM2Q8IWE5 1019 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 UCN2Q96RP3 112 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 TFIP11Q9UBB9 837 aaKnown RBP6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 CHIC2Q9UKJ5 165 aa6.49□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 SCARF1Q14162 830 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP17L2Q6R6M4 530 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 TSEN34Q9BSV6 310 aaKnown RBP6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 KLF16Q9BXK1 252 aaPredicted RBP6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 MAFBQ9Y5Q3 323 aaPredicted RBP6.48□□□□□ -1.37
RNU6-39P-201ENST00000384344 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 ADH1AP07327 375 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 LMOD1P29536 600 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms