RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
VPS16-203ENST00000380469 COG3Q96JB2 828 aa20.5■□□□□ 0.87
VPS16-203ENST00000380469 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
VPS16-203ENST00000380469 SETD1AO15047 1707 aaKnown RBP20.5■□□□□ 0.87
VPS16-203ENST00000380469 CDK12Q9NYV4 1490 aaPredicted RBP20.5■□□□□ 0.87
VPS16-203ENST00000380469 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
VPS16-203ENST00000380469 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
VPS16-203ENST00000380469 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 CHMP5Q9NZZ3 219 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 PTCH1Q13635 1447 aa20.48■□□□□ 0.87
VPS16-203ENST00000380469 MLECQ14165 292 aa20.47■□□□□ 0.87
VPS16-203ENST00000380469 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
VPS16-203ENST00000380469 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
VPS16-203ENST00000380469 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
VPS16-203ENST00000380469 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
VPS16-203ENST00000380469 ELL2O00472 640 aaPredicted RBP20.46■□□□□ 0.87
VPS16-203ENST00000380469 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
VPS16-203ENST00000380469 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
VPS16-203ENST00000380469 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
VPS16-203ENST00000380469 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.87
VPS16-203ENST00000380469 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
VPS16-203ENST00000380469 TSPOAP1O95153 1857 aa20.44■□□□□ 0.86
VPS16-203ENST00000380469 METP08581 1390 aa20.44■□□□□ 0.86
VPS16-203ENST00000380469 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
VPS16-203ENST00000380469 SIRT1Q96EB6 747 aa20.44■□□□□ 0.86
VPS16-203ENST00000380469 API5Q9BZZ5 524 aaKnown RBP20.44■□□□□ 0.86
VPS16-203ENST00000380469 ABCC4O15439 1325 aa20.44■□□□□ 0.86
VPS16-203ENST00000380469 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
VPS16-203ENST00000380469 MCM4P33991 863 aa20.43■□□□□ 0.86
VPS16-203ENST00000380469 RRS1Q15050 365 aaKnown RBP20.43■□□□□ 0.86
VPS16-203ENST00000380469 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
VPS16-203ENST00000380469 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
VPS16-203ENST00000380469 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
VPS16-203ENST00000380469 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
VPS16-203ENST00000380469 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
VPS16-203ENST00000380469 SNX21Q969T3 373 aa20.41■□□□□ 0.86
VPS16-203ENST00000380469 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
VPS16-203ENST00000380469 CPS1P31327 1500 aa20.39■□□□□ 0.86
VPS16-203ENST00000380469 MON2Q7Z3U7 1717 aa20.39■□□□□ 0.85
VPS16-203ENST00000380469 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.85
VPS16-203ENST00000380469 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
VPS16-203ENST00000380469 SIRT2Q8IXJ6 389 aa20.38■□□□□ 0.85
VPS16-203ENST00000380469 KIF24Q5T7B8 1368 aa20.38■□□□□ 0.85
VPS16-203ENST00000380469 HAP1P54257 671 aaPredicted RBP20.37■□□□□ 0.85
VPS16-203ENST00000380469 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
VPS16-203ENST00000380469 TECPR2O15040 1411 aa20.37■□□□□ 0.85
VPS16-203ENST00000380469 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
VPS16-203ENST00000380469 ITSN1Q15811 1721 aa20.36■□□□□ 0.85
VPS16-203ENST00000380469 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
VPS16-203ENST00000380469 AKAP12Q02952 1782 aa20.35■□□□□ 0.85
VPS16-203ENST00000380469 C3P01024 1663 aa20.35■□□□□ 0.85
VPS16-203ENST00000380469 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
VPS16-203ENST00000380469 TBC1D9Q6ZT07 1266 aa20.35■□□□□ 0.85
VPS16-203ENST00000380469 NCOA3Q9Y6Q9 1424 aa20.34■□□□□ 0.85
VPS16-203ENST00000380469 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.85
VPS16-203ENST00000380469 TRAK2O60296 914 aa20.33■□□□□ 0.85
VPS16-203ENST00000380469 GOLGA6L3A6NEY3 463 aa20.33■□□□□ 0.84
VPS16-203ENST00000380469 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.84
VPS16-203ENST00000380469 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.84
VPS16-203ENST00000380469 FAM43AQ8N2R8 423 aa20.33■□□□□ 0.84
VPS16-203ENST00000380469 CIZ1Q9ULV3 898 aaPredicted RBP20.32■□□□□ 0.84
VPS16-203ENST00000380469 PRR36Q9H6K5 1346 aa20.32■□□□□ 0.84
VPS16-203ENST00000380469 CDC45O75419 566 aa20.32■□□□□ 0.84
VPS16-203ENST00000380469 DDIT3P35638 169 aa20.31■□□□□ 0.84
VPS16-203ENST00000380469 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
VPS16-203ENST00000380469 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
VPS16-203ENST00000380469 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
VPS16-203ENST00000380469 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
VPS16-203ENST00000380469 KIF2CQ99661 725 aa20.3■□□□□ 0.84
VPS16-203ENST00000380469 DCTPP1Q9H773 170 aa20.3■□□□□ 0.84
VPS16-203ENST00000380469 HSP90AA1P07900 732 aaKnown RBP20.3■□□□□ 0.84
VPS16-203ENST00000380469 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
VPS16-203ENST00000380469 CHL1O00533 1208 aa20.29■□□□□ 0.84
VPS16-203ENST00000380469 TNRQ92752 1358 aa20.29■□□□□ 0.84
VPS16-203ENST00000380469 ROBO2Q9HCK4 1378 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 ACEP12821 1306 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 RPAP2Q8IXW5 612 aaPredicted RBP20.27■□□□□ 0.84
VPS16-203ENST00000380469 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
VPS16-203ENST00000380469 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
VPS16-203ENST00000380469 K7ELQ4 463 aaPredicted RBP20.26■□□□□ 0.83
VPS16-203ENST00000380469 PLEKHG3A1L390 1219 aa20.26■□□□□ 0.83
VPS16-203ENST00000380469 MCM10Q7L590 875 aa20.26■□□□□ 0.83
VPS16-203ENST00000380469 PTPRCP08575 1304 aa20.25■□□□□ 0.83
VPS16-203ENST00000380469 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
VPS16-203ENST00000380469 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.83
VPS16-203ENST00000380469 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
VPS16-203ENST00000380469 ARXQ96QS3 562 aa20.25■□□□□ 0.83
VPS16-203ENST00000380469 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
VPS16-203ENST00000380469 PTMSP20962 102 aa20.24■□□□□ 0.83
VPS16-203ENST00000380469 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
VPS16-203ENST00000380469 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
VPS16-203ENST00000380469 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
VPS16-203ENST00000380469 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms