RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.19■■□□□ 1.62
SSU72-204ENST00000378726 NOP58Q9Y2X3 529 aaKnown RBP25.18■■□□□ 1.62
SSU72-204ENST00000378726 PIK3C2AO00443 1686 aa25.17■■□□□ 1.62
SSU72-204ENST00000378726 BCAR3O75815 825 aa25.17■■□□□ 1.62
SSU72-204ENST00000378726 NFE2L2Q16236 605 aa25.17■■□□□ 1.62
SSU72-204ENST00000378726 AMPHP49418 695 aa25.16■■□□□ 1.62
SSU72-204ENST00000378726 FOXO3O43524 673 aa25.15■■□□□ 1.62
SSU72-204ENST00000378726 C20orf194Q5TEA3 1177 aa25.15■■□□□ 1.62
SSU72-204ENST00000378726 SULT6B1Q6IMI4 303 aa25.14■■□□□ 1.62
SSU72-204ENST00000378726 CRBNQ96SW2 442 aa25.14■■□□□ 1.61
SSU72-204ENST00000378726 IL16Q14005 1332 aa25.14■■□□□ 1.61
SSU72-204ENST00000378726 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
SSU72-204ENST00000378726 FLT4P35916 1363 aa25.13■■□□□ 1.61
SSU72-204ENST00000378726 PEAK1Q9H792 1746 aa25.12■■□□□ 1.61
SSU72-204ENST00000378726 TMEM94Q12767 1356 aa25.12■■□□□ 1.61
SSU72-204ENST00000378726 AEBP1Q8IUX7 1158 aa25.12■■□□□ 1.61
SSU72-204ENST00000378726 TSR2Q969E8 191 aaKnown RBP25.12■■□□□ 1.61
SSU72-204ENST00000378726 ATF3P18847 181 aa25.1■■□□□ 1.61
SSU72-204ENST00000378726 RARSP54136 660 aaKnown RBP25.09■■□□□ 1.61
SSU72-204ENST00000378726 XPCQ01831 940 aaPredicted RBP25.09■■□□□ 1.61
SSU72-204ENST00000378726 C1orf167Q5SNV9 1468 aa25.07■■□□□ 1.6
SSU72-204ENST00000378726 LMTK3Q96Q04 1460 aa25.07■■□□□ 1.6
SSU72-204ENST00000378726 HOXC9P31274 260 aa25.06■■□□□ 1.6
SSU72-204ENST00000378726 EXOSC9Q06265 439 aaKnown RBP25.06■■□□□ 1.6
SSU72-204ENST00000378726 NCOA3Q9Y6Q9 1424 aa25.06■■□□□ 1.6
SSU72-204ENST00000378726 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
SSU72-204ENST00000378726 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
SSU72-204ENST00000378726 ANP32AP39687 249 aaKnown RBP25.05■■□□□ 1.6
SSU72-204ENST00000378726 IPO9Q96P70 1041 aaKnown RBP25.05■■□□□ 1.6
SSU72-204ENST00000378726 STRCP1A6NGW2 1772 aa25.04■■□□□ 1.6
SSU72-204ENST00000378726 CT47B1P0C2W7 299 aaPredicted RBP25.04■■□□□ 1.6
SSU72-204ENST00000378726 CALD1Q05682 793 aaKnown RBP25.04■■□□□ 1.6
SSU72-204ENST00000378726 LMOD3Q0VAK6 560 aa25.04■■□□□ 1.6
SSU72-204ENST00000378726 EYA1Q99502 592 aa25.04■■□□□ 1.6
SSU72-204ENST00000378726 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
SSU72-204ENST00000378726 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
SSU72-204ENST00000378726 LAS1LQ9Y4W2 734 aaKnown RBP25.03■■□□□ 1.6
SSU72-204ENST00000378726 USP54Q70EL1 1684 aa25.03■■□□□ 1.6
SSU72-204ENST00000378726 LMOD2Q6P5Q4 547 aa25.02■■□□□ 1.6
SSU72-204ENST00000378726 KCNH5Q8NCM2 988 aa25.02■■□□□ 1.6
SSU72-204ENST00000378726 ARHGEF10O15013 1369 aa25.02■■□□□ 1.6
SSU72-204ENST00000378726 NBR1Q14596 966 aa25.02■■□□□ 1.6
SSU72-204ENST00000378726 CANXP27824 592 aaKnown RBP25.01■■□□□ 1.59
SSU72-204ENST00000378726 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
SSU72-204ENST00000378726 DEKP35659 375 aaKnown RBP25.01■■□□□ 1.59
SSU72-204ENST00000378726 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
SSU72-204ENST00000378726 BCL2L13Q9BXK5 485 aa25■■□□□ 1.59
SSU72-204ENST00000378726 FAM83GA6ND36 823 aa25■■□□□ 1.59
SSU72-204ENST00000378726 PDE3AQ14432 1141 aa25■■□□□ 1.59
SSU72-204ENST00000378726 LTV1Q96GA3 475 aaPredicted RBP24.99■■□□□ 1.59
SSU72-204ENST00000378726 IGSF1Q8N6C5 1336 aa24.99■■□□□ 1.59
SSU72-204ENST00000378726 MST1RQ04912 1400 aa24.99■■□□□ 1.59
SSU72-204ENST00000378726 RGPD1P0DJD0 1748 aa24.99■■□□□ 1.59
SSU72-204ENST00000378726 DCCP43146 1447 aa24.98■■□□□ 1.59
SSU72-204ENST00000378726 IP6K1Q92551 441 aa24.98■■□□□ 1.59
SSU72-204ENST00000378726 GNAI1P63096 354 aa24.98■■□□□ 1.59
SSU72-204ENST00000378726 PLEKHG5O94827 1062 aa24.97■■□□□ 1.59
SSU72-204ENST00000378726 DCTN1Q14203 1278 aa24.97■■□□□ 1.59
SSU72-204ENST00000378726 IFT57Q9NWB7 429 aa24.97■■□□□ 1.59
SSU72-204ENST00000378726 GCP02774 474 aa24.97■■□□□ 1.59
SSU72-204ENST00000378726 STRCQ7RTU9 1775 aa24.96■■□□□ 1.59
SSU72-204ENST00000378726 KDRP35968 1356 aa24.96■■□□□ 1.59
SSU72-204ENST00000378726 MSH6P52701 1360 aa24.96■■□□□ 1.59
SSU72-204ENST00000378726 ZNF853P0CG23 659 aa24.96■■□□□ 1.59
SSU72-204ENST00000378726 ZBTB7CA1YPR0 619 aa24.95■■□□□ 1.58
SSU72-204ENST00000378726 RTL1A6NKG5 1358 aa24.95■■□□□ 1.58
SSU72-204ENST00000378726 CFAP44Q96MT7 982 aa24.94■■□□□ 1.58
SSU72-204ENST00000378726 ZBTB47Q9UFB7 747 aaPredicted RBP24.94■■□□□ 1.58
SSU72-204ENST00000378726 PANK1Q8TE04 598 aa24.93■■□□□ 1.58
SSU72-204ENST00000378726 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
SSU72-204ENST00000378726 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
SSU72-204ENST00000378726 NFAT5O94916 1531 aa24.93■■□□□ 1.58
SSU72-204ENST00000378726 MTHFSDQ2M296 383 aaKnown RBP24.93■■□□□ 1.58
SSU72-204ENST00000378726 SSH1Q8WYL5 1049 aa24.92■■□□□ 1.58
SSU72-204ENST00000378726 MBIPQ9NS73 344 aa24.92■■□□□ 1.58
SSU72-204ENST00000378726 SMC4Q9NTJ3 1288 aa24.92■■□□□ 1.58
SSU72-204ENST00000378726 DLG5Q8TDM6 1919 aa24.92■■□□□ 1.58
SSU72-204ENST00000378726 ZNF335Q9H4Z2 1342 aaPredicted RBP24.91■■□□□ 1.58
SSU72-204ENST00000378726 TCERG1O14776 1098 aaKnown RBP24.91■■□□□ 1.58
SSU72-204ENST00000378726 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
SSU72-204ENST00000378726 MCM10Q7L590 875 aa24.9■■□□□ 1.58
SSU72-204ENST00000378726 COG6Q9Y2V7 657 aa24.9■■□□□ 1.58
SSU72-204ENST00000378726 USP19O94966 1318 aa24.89■■□□□ 1.58
SSU72-204ENST00000378726 ZKSCAN2Q63HK3 967 aa24.88■■□□□ 1.57
SSU72-204ENST00000378726 GAS2L2Q8NHY3 880 aa24.88■■□□□ 1.57
SSU72-204ENST00000378726 TNNQ9UQP3 1299 aa24.88■■□□□ 1.57
SSU72-204ENST00000378726 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
SSU72-204ENST00000378726 TRPM3Q9HCF6 1732 aaPredicted RBP24.88■■□□□ 1.57
SSU72-204ENST00000378726 LTN1O94822 1766 aa24.87■■□□□ 1.57
SSU72-204ENST00000378726 VAMP4O75379 141 aa24.87■■□□□ 1.57
SSU72-204ENST00000378726 ALDH1L2Q3SY69 923 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 USHBP1Q8N6Y0 703 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 RTF1Q92541 710 aaKnown RBP24.86■■□□□ 1.57
SSU72-204ENST00000378726 CLUAP1Q96AJ1 413 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 ZNF428Q96B54 188 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 RLBP1P12271 317 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 PDE4AP27815 886 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 NBPF6Q5VWK0 638 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
SSU72-204ENST00000378726 NBPF4Q96M43 638 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms