RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TRAK2O60296 914 aa16.1■□□□□ 0.17
USP11-204ENST00000377107 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
USP11-204ENST00000377107 F6X3S4 739 aa16.1■□□□□ 0.17
USP11-204ENST00000377107 FOXO3O43524 673 aa16.1■□□□□ 0.17
USP11-204ENST00000377107 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
USP11-204ENST00000377107 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
USP11-204ENST00000377107 AMPHP49418 695 aa16.1■□□□□ 0.17
USP11-204ENST00000377107 API5Q9BZZ5 524 aaKnown RBP16.1■□□□□ 0.17
USP11-204ENST00000377107 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
USP11-204ENST00000377107 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
USP11-204ENST00000377107 NOL8Q76FK4 1167 aaKnown RBP16.09■□□□□ 0.17
USP11-204ENST00000377107 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
USP11-204ENST00000377107 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
USP11-204ENST00000377107 METP08581 1390 aa16.09■□□□□ 0.17
USP11-204ENST00000377107 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
USP11-204ENST00000377107 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.17
USP11-204ENST00000377107 CFAP44Q96MT7 982 aa16.08■□□□□ 0.17
USP11-204ENST00000377107 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
USP11-204ENST00000377107 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.16
USP11-204ENST00000377107 NEO1Q92859 1461 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 PTPRMP28827 1452 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
USP11-204ENST00000377107 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
USP11-204ENST00000377107 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
USP11-204ENST00000377107 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
USP11-204ENST00000377107 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
USP11-204ENST00000377107 PIK3C2BO00750 1634 aa16.06■□□□□ 0.16
USP11-204ENST00000377107 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
USP11-204ENST00000377107 ACEP12821 1306 aa16.06■□□□□ 0.16
USP11-204ENST00000377107 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
USP11-204ENST00000377107 L1TD1Q5T7N2 865 aaKnown RBP16.05■□□□□ 0.16
USP11-204ENST00000377107 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
USP11-204ENST00000377107 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
USP11-204ENST00000377107 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
USP11-204ENST00000377107 MEIS3Q99687 375 aa16.05■□□□□ 0.16
USP11-204ENST00000377107 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
USP11-204ENST00000377107 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
USP11-204ENST00000377107 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
USP11-204ENST00000377107 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
USP11-204ENST00000377107 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
USP11-204ENST00000377107 CDC45O75419 566 aa16.03■□□□□ 0.16
USP11-204ENST00000377107 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
USP11-204ENST00000377107 NEURL4Q96JN8 1562 aa16.03■□□□□ 0.16
USP11-204ENST00000377107 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.16
USP11-204ENST00000377107 NLRP6P59044 892 aa16.02■□□□□ 0.16
USP11-204ENST00000377107 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.16
USP11-204ENST00000377107 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.16
USP11-204ENST00000377107 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
USP11-204ENST00000377107 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.15
USP11-204ENST00000377107 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
USP11-204ENST00000377107 ALKQ9UM73 1620 aa16.01■□□□□ 0.15
USP11-204ENST00000377107 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
USP11-204ENST00000377107 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
USP11-204ENST00000377107 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
USP11-204ENST00000377107 G2E3Q7L622 706 aa16.01■□□□□ 0.15
USP11-204ENST00000377107 GBP4Q96PP9 640 aa16.01■□□□□ 0.15
USP11-204ENST00000377107 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
USP11-204ENST00000377107 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
USP11-204ENST00000377107 ZFYVE9O95405 1425 aa16■□□□□ 0.15
USP11-204ENST00000377107 NLRP1Q9C000 1473 aa16■□□□□ 0.15
USP11-204ENST00000377107 TRIM6-TRIM34B2RNG4 842 aa16■□□□□ 0.15
USP11-204ENST00000377107 RILPL2Q969X0 211 aa16■□□□□ 0.15
USP11-204ENST00000377107 STK31Q9BXU1 1019 aa16■□□□□ 0.15
USP11-204ENST00000377107 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
USP11-204ENST00000377107 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
USP11-204ENST00000377107 MYO5BQ9ULV0 1848 aa16■□□□□ 0.15
USP11-204ENST00000377107 XRCC6P12956 609 aaKnown RBP eCLIP15.99■□□□□ 0.15
USP11-204ENST00000377107 CASC1Q6TDU7 716 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
USP11-204ENST00000377107 SSFA2P28290 1259 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 ARHGEF40Q8TER5 1519 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 FAM135BQ49AJ0 1406 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
USP11-204ENST00000377107 ZMYM3Q14202 1370 aa15.99■□□□□ 0.15
USP11-204ENST00000377107 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
USP11-204ENST00000377107 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
USP11-204ENST00000377107 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
USP11-204ENST00000377107 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
USP11-204ENST00000377107 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
USP11-204ENST00000377107 ARHGAP45Q92619 1136 aa15.98■□□□□ 0.15
USP11-204ENST00000377107 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
USP11-204ENST00000377107 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
USP11-204ENST00000377107 LTKP29376 864 aa15.97■□□□□ 0.15
USP11-204ENST00000377107 MTHFSDQ2M296 383 aaKnown RBP15.97■□□□□ 0.15
USP11-204ENST00000377107 AMOTL2Q9Y2J4 779 aa15.97■□□□□ 0.15
USP11-204ENST00000377107 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
USP11-204ENST00000377107 ZNF853P0CG23 659 aa15.96■□□□□ 0.15
USP11-204ENST00000377107 DDX49Q9Y6V7 483 aaKnown RBP15.96■□□□□ 0.15
USP11-204ENST00000377107 MCTP1Q6DN14 999 aa15.95■□□□□ 0.14
USP11-204ENST00000377107 TRIM44Q96DX7 344 aaPredicted RBP15.95■□□□□ 0.14
USP11-204ENST00000377107 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
USP11-204ENST00000377107 ABCC4O15439 1325 aa15.95■□□□□ 0.14
USP11-204ENST00000377107 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
USP11-204ENST00000377107 NAP1L5Q96NT1 182 aaPredicted RBP15.95■□□□□ 0.14
USP11-204ENST00000377107 SDSP20132 328 aa15.95■□□□□ 0.14
USP11-204ENST00000377107 HAP1P54257 671 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms