RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L21D6R901 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 NCOA4Q13772 614 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 PLPP7Q8NBV4 271 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 ADAM32Q8TC27 787 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 UNC93B1Q9H1C4 597 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
SSX3-203ENST00000376895 LZTS3O60299 673 aaPredicted RBP9.05□□□□□ -0.96
SSX3-203ENST00000376895 TMEM164Q5U3C3 297 aa9.05□□□□□ -0.96
SSX3-203ENST00000376895 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
SSX3-203ENST00000376895 CCDC24Q8N4L8 307 aa9.05□□□□□ -0.96
SSX3-203ENST00000376895 STK32AQ8WU08 396 aa9.05□□□□□ -0.96
SSX3-203ENST00000376895 KCTD12Q96CX2 325 aaKnown RBP9.05□□□□□ -0.96
SSX3-203ENST00000376895 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
SSX3-203ENST00000376895 LARP1Q6PKG0 1096 aaKnown RBP9.04□□□□□ -0.96
SSX3-203ENST00000376895 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
SSX3-203ENST00000376895 MTRQ99707 1265 aa9.04□□□□□ -0.96
SSX3-203ENST00000376895 EML3Q32P44 896 aa9.03□□□□□ -0.96
SSX3-203ENST00000376895 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
SSX3-203ENST00000376895 DZIP3Q86Y13 1208 aaKnown RBP9.03□□□□□ -0.96
SSX3-203ENST00000376895 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
SSX3-203ENST00000376895 SLC6A16Q9GZN6 736 aa9.03□□□□□ -0.96
SSX3-203ENST00000376895 RASA1P20936 1047 aa9.02□□□□□ -0.97
SSX3-203ENST00000376895 CRTC2Q53ET0 693 aaPredicted RBP9.02□□□□□ -0.97
SSX3-203ENST00000376895 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
SSX3-203ENST00000376895 CADPSQ9ULU8 1353 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 SND1Q7KZF4 910 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSX3-203ENST00000376895 PHTF2Q8N3S3 785 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 IL21Q9HBE4 155 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 MTMR7Q9Y216 660 aa9.01□□□□□ -0.97
SSX3-203ENST00000376895 GNEQ9Y223 722 aaKnown RBP9.01□□□□□ -0.97
SSX3-203ENST00000376895 PTK7Q13308 1070 aa9□□□□□ -0.97
SSX3-203ENST00000376895 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
SSX3-203ENST00000376895 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
SSX3-203ENST00000376895 CHIC2Q9UKJ5 165 aa9□□□□□ -0.97
SSX3-203ENST00000376895 ATP1A2P50993 1020 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 TRAF7Q6Q0C0 670 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 BPHLQ86WA6 291 aaPredicted RBP8.99□□□□□ -0.97
SSX3-203ENST00000376895 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
SSX3-203ENST00000376895 AGERQ15109 404 aa8.98□□□□□ -0.97
SSX3-203ENST00000376895 PTCRAQ6ISU1 281 aaPredicted RBP8.98□□□□□ -0.97
SSX3-203ENST00000376895 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
SSX3-203ENST00000376895 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
SSX3-203ENST00000376895 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
SSX3-203ENST00000376895 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
SSX3-203ENST00000376895 LINC01559Q495D7 138 aa8.97□□□□□ -0.97
SSX3-203ENST00000376895 ERFEQ4G0M1 354 aa8.97□□□□□ -0.97
SSX3-203ENST00000376895 TJAP1Q5JTD0 557 aa8.97□□□□□ -0.97
SSX3-203ENST00000376895 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
SSX3-203ENST00000376895 CDCA7Q9BWT1 371 aaPredicted RBP8.97□□□□□ -0.97
SSX3-203ENST00000376895 CFTRP13569 1480 aa8.96□□□□□ -0.97
SSX3-203ENST00000376895 PTPN5P54829 565 aa8.96□□□□□ -0.98
SSX3-203ENST00000376895 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
SSX3-203ENST00000376895 NBPF20Q3BBV1 942 aa8.96□□□□□ -0.98
SSX3-203ENST00000376895 ZNF511Q8NB15 262 aa8.96□□□□□ -0.98
SSX3-203ENST00000376895 ZNF594Q96JF6 807 aaPredicted RBP8.96□□□□□ -0.98
SSX3-203ENST00000376895 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
SSX3-203ENST00000376895 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
SSX3-203ENST00000376895 S1PR4O95977 384 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 DPYDQ12882 1025 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 BAP1Q92560 729 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
SSX3-203ENST00000376895 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
SSX3-203ENST00000376895 CLDN10P78369 228 aa8.94□□□□□ -0.98
SSX3-203ENST00000376895 FOXJ1Q92949 421 aa8.94□□□□□ -0.98
SSX3-203ENST00000376895 CCDC85AQ96PX6 553 aaPredicted RBP8.94□□□□□ -0.98
SSX3-203ENST00000376895 CDV3Q9UKY7 258 aaKnown RBP8.94□□□□□ -0.98
SSX3-203ENST00000376895 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
SSX3-203ENST00000376895 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
SSX3-203ENST00000376895 POTEMA6NI47 508 aa8.93□□□□□ -0.98
SSX3-203ENST00000376895 SSFA2P28290 1259 aa8.93□□□□□ -0.98
SSX3-203ENST00000376895 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
SSX3-203ENST00000376895 TXNDC2Q86VQ3 553 aa8.93□□□□□ -0.98
SSX3-203ENST00000376895 LARGE2Q8N3Y3 721 aa8.93□□□□□ -0.98
SSX3-203ENST00000376895 FOXD4L4Q8WXT5 416 aaPredicted RBP8.93□□□□□ -0.98
SSX3-203ENST00000376895 NESP48681 1621 aa8.92□□□□□ -0.98
SSX3-203ENST00000376895 LAMC3Q9Y6N6 1575 aa8.92□□□□□ -0.98
SSX3-203ENST00000376895 GIGYF1O75420 1035 aaPredicted RBP8.92□□□□□ -0.98
SSX3-203ENST00000376895 ATP2B4P23634 1241 aa8.92□□□□□ -0.98
SSX3-203ENST00000376895 GTF2IP78347 998 aa8.92□□□□□ -0.98
SSX3-203ENST00000376895 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
SSX3-203ENST00000376895 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms