RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
MSH5-204ENST00000375755 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
MSH5-204ENST00000375755 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
MSH5-204ENST00000375755 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 ESPNB1AK53 854 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
MSH5-204ENST00000375755 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
MSH5-204ENST00000375755 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
MSH5-204ENST00000375755 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
MSH5-204ENST00000375755 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
MSH5-204ENST00000375755 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
MSH5-204ENST00000375755 CDC42BPGQ6DT37 1551 aa16.28■□□□□ 0.2
MSH5-204ENST00000375755 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
MSH5-204ENST00000375755 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
MSH5-204ENST00000375755 ACEP12821 1306 aa16.27■□□□□ 0.2
MSH5-204ENST00000375755 KCNA6P17658 529 aa16.27■□□□□ 0.2
MSH5-204ENST00000375755 TNNQ9UQP3 1299 aa16.27■□□□□ 0.19
MSH5-204ENST00000375755 TBX22Q9Y458 520 aa16.27■□□□□ 0.19
MSH5-204ENST00000375755 EDC4Q6P2E9 1401 aaKnown RBP16.26■□□□□ 0.19
MSH5-204ENST00000375755 MON2Q7Z3U7 1717 aa16.26■□□□□ 0.19
MSH5-204ENST00000375755 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
MSH5-204ENST00000375755 SOX12O15370 315 aa16.26■□□□□ 0.19
MSH5-204ENST00000375755 DIAPH1O60610 1272 aaKnown RBP16.26■□□□□ 0.19
MSH5-204ENST00000375755 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
MSH5-204ENST00000375755 RLBP1P12271 317 aa16.25■□□□□ 0.19
MSH5-204ENST00000375755 HMOX1P09601 288 aa16.25■□□□□ 0.19
MSH5-204ENST00000375755 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
MSH5-204ENST00000375755 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
MSH5-204ENST00000375755 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
MSH5-204ENST00000375755 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
MSH5-204ENST00000375755 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
MSH5-204ENST00000375755 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
MSH5-204ENST00000375755 COG3Q96JB2 828 aa16.22■□□□□ 0.19
MSH5-204ENST00000375755 ADGRB2O60241 1585 aa16.22■□□□□ 0.19
MSH5-204ENST00000375755 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
MSH5-204ENST00000375755 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
MSH5-204ENST00000375755 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
MSH5-204ENST00000375755 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
MSH5-204ENST00000375755 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.19
MSH5-204ENST00000375755 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
MSH5-204ENST00000375755 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
MSH5-204ENST00000375755 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
MSH5-204ENST00000375755 TTC21BQ7Z4L5 1316 aa16.21■□□□□ 0.19
MSH5-204ENST00000375755 PHACTR3Q96KR7 559 aa16.2■□□□□ 0.18
MSH5-204ENST00000375755 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
MSH5-204ENST00000375755 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
MSH5-204ENST00000375755 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
MSH5-204ENST00000375755 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
MSH5-204ENST00000375755 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
MSH5-204ENST00000375755 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
MSH5-204ENST00000375755 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
MSH5-204ENST00000375755 AAMPQ13685 434 aa16.19■□□□□ 0.18
MSH5-204ENST00000375755 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
MSH5-204ENST00000375755 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 TPM2P07951 284 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 RIPK4P57078 832 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 IL13P35225 146 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 NRKQ7Z2Y5 1582 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
MSH5-204ENST00000375755 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 USP6P35125 1406 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 ANKLE2Q86XL3 938 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 DDIT3P35638 169 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
MSH5-204ENST00000375755 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
MSH5-204ENST00000375755 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
MSH5-204ENST00000375755 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
MSH5-204ENST00000375755 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
MSH5-204ENST00000375755 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
MSH5-204ENST00000375755 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
MSH5-204ENST00000375755 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
MSH5-204ENST00000375755 HSP90AB2PQ58FF8 381 aa16.14■□□□□ 0.17
MSH5-204ENST00000375755 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
MSH5-204ENST00000375755 FCHSD2O94868 740 aa16.13■□□□□ 0.17
MSH5-204ENST00000375755 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
MSH5-204ENST00000375755 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
MSH5-204ENST00000375755 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
MSH5-204ENST00000375755 OVOS2A0A0J9YW53 1432 aa16.12■□□□□ 0.17
MSH5-204ENST00000375755 OVOS2Q6IE36 1432 aa16.12■□□□□ 0.17
MSH5-204ENST00000375755 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
MSH5-204ENST00000375755 EXOSC9Q06265 439 aaKnown RBP16.12■□□□□ 0.17
MSH5-204ENST00000375755 CDK12Q9NYV4 1490 aaPredicted RBP16.11■□□□□ 0.17
MSH5-204ENST00000375755 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
MSH5-204ENST00000375755 EIF4A2Q14240 407 aaKnown RBP16.11■□□□□ 0.17
MSH5-204ENST00000375755 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
MSH5-204ENST00000375755 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
MSH5-204ENST00000375755 DCTN1Q14203 1278 aa16.09■□□□□ 0.17
MSH5-204ENST00000375755 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
MSH5-204ENST00000375755 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
MSH5-204ENST00000375755 RAB3GAP1Q15042 981 aa16.08■□□□□ 0.17
MSH5-204ENST00000375755 GBP4Q96PP9 640 aa16.08■□□□□ 0.17
MSH5-204ENST00000375755 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
MSH5-204ENST00000375755 SNX21Q969T3 373 aa16.08■□□□□ 0.16
MSH5-204ENST00000375755 DLG5Q8TDM6 1919 aa16.08■□□□□ 0.16
MSH5-204ENST00000375755 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms