RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
CDKN1A-202ENST00000373711 NLRP6P59044 892 aa21.53■■□□□ 1.04
CDKN1A-202ENST00000373711 STK32BQ9NY57 414 aa21.53■■□□□ 1.04
CDKN1A-202ENST00000373711 COL18A1P39060 1754 aa21.53■■□□□ 1.04
CDKN1A-202ENST00000373711 USP6P35125 1406 aa21.53■■□□□ 1.04
CDKN1A-202ENST00000373711 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
CDKN1A-202ENST00000373711 CENPJQ9HC77 1338 aaPredicted RBP21.52■■□□□ 1.03
CDKN1A-202ENST00000373711 PIK3C2AO00443 1686 aa21.5■■□□□ 1.03
CDKN1A-202ENST00000373711 ZBTB7AO95365 584 aa21.5■■□□□ 1.03
CDKN1A-202ENST00000373711 RGPD5Q99666 1765 aa21.49■■□□□ 1.03
CDKN1A-202ENST00000373711 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
CDKN1A-202ENST00000373711 ZNF784Q8NCA9 323 aaPredicted RBP21.48■■□□□ 1.03
CDKN1A-202ENST00000373711 KCNH5Q8NCM2 988 aa21.47■■□□□ 1.03
CDKN1A-202ENST00000373711 MTFR1LQ9H019 292 aa21.47■■□□□ 1.03
CDKN1A-202ENST00000373711 CABP2Q9NPB3 220 aa21.47■■□□□ 1.03
CDKN1A-202ENST00000373711 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 PTGER2P43116 358 aa21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 MARCH10Q8NA82 808 aaPredicted RBP21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 ATF5Q9Y2D1 282 aaPredicted RBP21.46■■□□□ 1.03
CDKN1A-202ENST00000373711 ABCC6O95255 1503 aa21.45■■□□□ 1.02
CDKN1A-202ENST00000373711 NHSQ6T4R5 1651 aa21.45■■□□□ 1.02
CDKN1A-202ENST00000373711 CARD10Q9BWT7 1032 aa21.45■■□□□ 1.02
CDKN1A-202ENST00000373711 EXOC5O00471 708 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 PROM2Q8N271 834 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 CCDC7Q96M83 1385 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 TRPM1Q7Z4N2 1603 aa21.44■■□□□ 1.02
CDKN1A-202ENST00000373711 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
CDKN1A-202ENST00000373711 TNS2Q63HR2 1409 aa21.43■■□□□ 1.02
CDKN1A-202ENST00000373711 PTF1AQ7RTS3 328 aa21.42■■□□□ 1.02
CDKN1A-202ENST00000373711 NBPF1Q3BBV0 1214 aa21.41■■□□□ 1.02
CDKN1A-202ENST00000373711 AXIN2Q9Y2T1 843 aa21.41■■□□□ 1.02
CDKN1A-202ENST00000373711 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 UTRNP46939 3433 aa21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 ARHGEF25Q86VW2 580 aa21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
CDKN1A-202ENST00000373711 MAP3K5Q99683 1374 aa21.39■■□□□ 1.02
CDKN1A-202ENST00000373711 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
CDKN1A-202ENST00000373711 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
CDKN1A-202ENST00000373711 ARXQ96QS3 562 aa21.37■■□□□ 1.01
CDKN1A-202ENST00000373711 BTAF1O14981 1849 aa21.36■■□□□ 1.01
CDKN1A-202ENST00000373711 TTC21BQ7Z4L5 1316 aa21.36■■□□□ 1.01
CDKN1A-202ENST00000373711 C1QTNF8P60827 252 aa21.36■■□□□ 1.01
CDKN1A-202ENST00000373711 NFAT5O94916 1531 aa21.35■■□□□ 1.01
CDKN1A-202ENST00000373711 SGIP1Q9BQI5 828 aa21.35■■□□□ 1.01
CDKN1A-202ENST00000373711 QSER1Q2KHR3 1735 aa21.35■■□□□ 1.01
CDKN1A-202ENST00000373711 SOX12O15370 315 aa21.34■■□□□ 1.01
CDKN1A-202ENST00000373711 MON2Q7Z3U7 1717 aa21.32■■□□□ 1
CDKN1A-202ENST00000373711 LTN1O94822 1766 aa21.32■■□□□ 1
CDKN1A-202ENST00000373711 USP54Q70EL1 1684 aa21.31■■□□□ 1
CDKN1A-202ENST00000373711 GPR162Q16538 588 aa21.3■■□□□ 1
CDKN1A-202ENST00000373711 KTN1Q86UP2 1357 aaKnown RBP21.29■■□□□ 1
CDKN1A-202ENST00000373711 SLC16A10Q8TF71 515 aa21.29■■□□□ 1
CDKN1A-202ENST00000373711 ACSBG1Q96GR2 724 aa21.29■■□□□ 1
CDKN1A-202ENST00000373711 IL2RBP14784 551 aa21.28■■□□□ 1
CDKN1A-202ENST00000373711 POLD1P28340 1107 aa21.28■■□□□ 1
CDKN1A-202ENST00000373711 ERBB3P21860 1342 aa21.28■■□□□ 1
CDKN1A-202ENST00000373711 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
CDKN1A-202ENST00000373711 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
CDKN1A-202ENST00000373711 NLRP2Q9NX02 1062 aa21.26■□□□□ 0.99
CDKN1A-202ENST00000373711 FAM208AQ9UK61 1670 aaKnown RBP21.25■□□□□ 0.99
CDKN1A-202ENST00000373711 SLC27A3Q5K4L6 730 aa21.24■□□□□ 0.99
CDKN1A-202ENST00000373711 USP31Q70CQ4 1352 aa21.23■□□□□ 0.99
CDKN1A-202ENST00000373711 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
CDKN1A-202ENST00000373711 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
CDKN1A-202ENST00000373711 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
CDKN1A-202ENST00000373711 TUBGCP6Q96RT7 1819 aa21.21■□□□□ 0.99
CDKN1A-202ENST00000373711 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
CDKN1A-202ENST00000373711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.18■□□□□ 0.98
CDKN1A-202ENST00000373711 ANKRD24Q8TF21 1146 aa21.18■□□□□ 0.98
CDKN1A-202ENST00000373711 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
CDKN1A-202ENST00000373711 LRRC4BQ9NT99 713 aa21.18■□□□□ 0.98
CDKN1A-202ENST00000373711 LY75O60449 1722 aa21.18■□□□□ 0.98
CDKN1A-202ENST00000373711 IFFO2Q5TF58 517 aa21.17■□□□□ 0.98
CDKN1A-202ENST00000373711 TFCP2L1Q9NZI6 479 aa21.17■□□□□ 0.98
CDKN1A-202ENST00000373711 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
CDKN1A-202ENST00000373711 DOT1LQ8TEK3 1739 aa21.16■□□□□ 0.98
CDKN1A-202ENST00000373711 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
CDKN1A-202ENST00000373711 SBNO2Q9Y2G9 1366 aa21.15■□□□□ 0.98
CDKN1A-202ENST00000373711 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
CDKN1A-202ENST00000373711 L3MBTL2Q969R5 705 aa21.15■□□□□ 0.98
CDKN1A-202ENST00000373711 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
CDKN1A-202ENST00000373711 GOLGB1Q14789 3259 aaKnown RBP21.14■□□□□ 0.97
CDKN1A-202ENST00000373711 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
CDKN1A-202ENST00000373711 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
CDKN1A-202ENST00000373711 NME9Q86XW9 330 aa21.12■□□□□ 0.97
CDKN1A-202ENST00000373711 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
CDKN1A-202ENST00000373711 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
CDKN1A-202ENST00000373711 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
CDKN1A-202ENST00000373711 CD163L1Q9NR16 1453 aa21.09■□□□□ 0.97
CDKN1A-202ENST00000373711 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
CDKN1A-202ENST00000373711 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
CDKN1A-202ENST00000373711 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
CDKN1A-202ENST00000373711 IP6K1Q92551 441 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms