RNA–Protein interactions for RNA: ENST00000372836.4

CNPY3-201, Transcript of canopy FGF signaling regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNPY3, Length 1,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPY3-201ENST00000372836 CT47B1P0C2W7 299 aaPredicted RBP29.15■■■□□ 2.26
CNPY3-201ENST00000372836 AMPHP49418 695 aa29.15■■■□□ 2.26
CNPY3-201ENST00000372836 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
CNPY3-201ENST00000372836 PHACTR3Q96KR7 559 aa29.14■■■□□ 2.26
CNPY3-201ENST00000372836 SOX12O15370 315 aa29.14■■■□□ 2.25
CNPY3-201ENST00000372836 CALD1Q05682 793 aaKnown RBP29.14■■■□□ 2.25
CNPY3-201ENST00000372836 LMOD3Q0VAK6 560 aa29.12■■■□□ 2.25
CNPY3-201ENST00000372836 KIF1AQ12756 1690 aa29.12■■■□□ 2.25
CNPY3-201ENST00000372836 CADPS2Q86UW7 1296 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 KCNH5Q8NCM2 988 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 MARF1Q9Y4F3 1742 aaKnown RBP29.11■■■□□ 2.25
CNPY3-201ENST00000372836 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 FOXO3O43524 673 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 PLIN1O60240 522 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 STRCP1A6NGW2 1772 aa29.11■■■□□ 2.25
CNPY3-201ENST00000372836 NUTM2GQ5VZR2 741 aa29.1■■■□□ 2.25
CNPY3-201ENST00000372836 SULT6B1Q6IMI4 303 aa29.1■■■□□ 2.25
CNPY3-201ENST00000372836 B4GALNT3Q6L9W6 998 aa29.1■■■□□ 2.25
CNPY3-201ENST00000372836 CCDC136Q96JN2 1154 aa29.09■■■□□ 2.25
CNPY3-201ENST00000372836 RTL1A6NKG5 1358 aa29.09■■■□□ 2.25
CNPY3-201ENST00000372836 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.25
CNPY3-201ENST00000372836 RGPD1P0DJD0 1748 aa29.08■■■□□ 2.25
CNPY3-201ENST00000372836 MST1RQ04912 1400 aa29.07■■■□□ 2.24
CNPY3-201ENST00000372836 STRCQ7RTU9 1775 aa29.07■■■□□ 2.24
CNPY3-201ENST00000372836 HOXC9P31274 260 aa29.06■■■□□ 2.24
CNPY3-201ENST00000372836 FANCIQ9NVI1 1328 aa29.06■■■□□ 2.24
CNPY3-201ENST00000372836 MSH6P52701 1360 aa29.05■■■□□ 2.24
CNPY3-201ENST00000372836 KRT28Q7Z3Y7 464 aa29.05■■■□□ 2.24
CNPY3-201ENST00000372836 RARSP54136 660 aaKnown RBP29.04■■■□□ 2.24
CNPY3-201ENST00000372836 KDRP35968 1356 aa29.04■■■□□ 2.24
CNPY3-201ENST00000372836 BCAR3O75815 825 aa29.03■■■□□ 2.24
CNPY3-201ENST00000372836 IGSF1Q8N6C5 1336 aa29.03■■■□□ 2.24
CNPY3-201ENST00000372836 AEBP1Q8IUX7 1158 aa29.02■■■□□ 2.24
CNPY3-201ENST00000372836 NFAT5O94916 1531 aa29.01■■■□□ 2.23
CNPY3-201ENST00000372836 PDE3AQ14432 1141 aa29■■■□□ 2.23
CNPY3-201ENST00000372836 IP6K1Q92551 441 aa29■■■□□ 2.23
CNPY3-201ENST00000372836 CRBNQ96SW2 442 aa29■■■□□ 2.23
CNPY3-201ENST00000372836 GNAI1P63096 354 aa28.99■■■□□ 2.23
CNPY3-201ENST00000372836 TSR2Q969E8 191 aaKnown RBP28.99■■■□□ 2.23
CNPY3-201ENST00000372836 EYA1Q99502 592 aa28.99■■■□□ 2.23
CNPY3-201ENST00000372836 IFT57Q9NWB7 429 aa28.99■■■□□ 2.23
CNPY3-201ENST00000372836 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
CNPY3-201ENST00000372836 C20orf194Q5TEA3 1177 aa28.97■■■□□ 2.23
CNPY3-201ENST00000372836 GCP02774 474 aa28.97■■■□□ 2.23
CNPY3-201ENST00000372836 EXOSC9Q06265 439 aaKnown RBP28.97■■■□□ 2.23
CNPY3-201ENST00000372836 USP19O94966 1318 aa28.96■■■□□ 2.23
CNPY3-201ENST00000372836 ZNF428Q96B54 188 aa28.96■■■□□ 2.23
CNPY3-201ENST00000372836 SLIT3O75094 1523 aa28.96■■■□□ 2.23
CNPY3-201ENST00000372836 PHRF1Q9P1Y6 1649 aaKnown RBP28.96■■■□□ 2.23
CNPY3-201ENST00000372836 NPHP3Q7Z494 1330 aa28.95■■■□□ 2.23
CNPY3-201ENST00000372836 XPCQ01831 940 aaPredicted RBP28.95■■■□□ 2.23
CNPY3-201ENST00000372836 ZNF853P0CG23 659 aa28.94■■■□□ 2.22
CNPY3-201ENST00000372836 CFAP44Q96MT7 982 aa28.94■■■□□ 2.22
CNPY3-201ENST00000372836 CANXP27824 592 aaKnown RBP28.92■■■□□ 2.22
CNPY3-201ENST00000372836 ARHGEF25Q86VW2 580 aa28.91■■■□□ 2.22
CNPY3-201ENST00000372836 LTN1O94822 1766 aa28.91■■■□□ 2.22
CNPY3-201ENST00000372836 DLG5Q8TDM6 1919 aa28.91■■■□□ 2.22
CNPY3-201ENST00000372836 LMOD2Q6P5Q4 547 aa28.9■■■□□ 2.22
CNPY3-201ENST00000372836 GAS2L2Q8NHY3 880 aa28.9■■■□□ 2.22
CNPY3-201ENST00000372836 THUMPD2Q9BTF0 503 aaKnown RBP28.88■■■□□ 2.21
CNPY3-201ENST00000372836 ZNF335Q9H4Z2 1342 aaPredicted RBP28.88■■■□□ 2.21
CNPY3-201ENST00000372836 XIRP1Q702N8 1843 aaKnown RBP28.88■■■□□ 2.21
CNPY3-201ENST00000372836 ALS2Q96Q42 1657 aa28.87■■■□□ 2.21
CNPY3-201ENST00000372836 HTATSF1O43719 755 aaKnown RBP28.87■■■□□ 2.21
CNPY3-201ENST00000372836 MS4A1P11836 297 aa28.87■■■□□ 2.21
CNPY3-201ENST00000372836 AAMPQ13685 434 aa28.87■■■□□ 2.21
CNPY3-201ENST00000372836 ALDH1L2Q3SY69 923 aa28.87■■■□□ 2.21
CNPY3-201ENST00000372836 LAS1LQ9Y4W2 734 aaKnown RBP28.87■■■□□ 2.21
CNPY3-201ENST00000372836 FRAT1Q92837 279 aaPredicted RBP28.86■■■□□ 2.21
CNPY3-201ENST00000372836 FAM83GA6ND36 823 aa28.85■■■□□ 2.21
CNPY3-201ENST00000372836 MTHFSDQ2M296 383 aaKnown RBP28.85■■■□□ 2.21
CNPY3-201ENST00000372836 MBIPQ9NS73 344 aa28.84■■■□□ 2.21
CNPY3-201ENST00000372836 BRPF1P55201 1214 aaPredicted RBP28.83■■■□□ 2.21
CNPY3-201ENST00000372836 LTV1Q96GA3 475 aaPredicted RBP28.83■■■□□ 2.21
CNPY3-201ENST00000372836 SMC4Q9NTJ3 1288 aa28.83■■■□□ 2.21
CNPY3-201ENST00000372836 RTF1Q92541 710 aaKnown RBP28.83■■■□□ 2.21
CNPY3-201ENST00000372836 ZKSCAN2Q63HK3 967 aa28.82■■■□□ 2.2
CNPY3-201ENST00000372836 SSH1Q8WYL5 1049 aa28.82■■■□□ 2.2
CNPY3-201ENST00000372836 TSHZ2Q9NRE2 1034 aa28.81■■■□□ 2.2
CNPY3-201ENST00000372836 SLAIN2Q9P270 581 aa28.81■■■□□ 2.2
CNPY3-201ENST00000372836 TNS3Q68CZ2 1445 aa28.81■■■□□ 2.2
CNPY3-201ENST00000372836 DCTN1Q14203 1278 aa28.8■■■□□ 2.2
CNPY3-201ENST00000372836 BCL2L13Q9BXK5 485 aa28.8■■■□□ 2.2
CNPY3-201ENST00000372836 CHL1O00533 1208 aa28.8■■■□□ 2.2
CNPY3-201ENST00000372836 HAP1P54257 671 aaPredicted RBP28.8■■■□□ 2.2
CNPY3-201ENST00000372836 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
CNPY3-201ENST00000372836 PXDNQ92626 1479 aa28.8■■■□□ 2.2
CNPY3-201ENST00000372836 KIF16BQ96L93 1317 aa28.79■■■□□ 2.2
CNPY3-201ENST00000372836 SPATA31A3Q5VYP0 1347 aa28.78■■■□□ 2.2
CNPY3-201ENST00000372836 IPO8O15397 1037 aaKnown RBP28.78■■■□□ 2.2
CNPY3-201ENST00000372836 VAMP4O75379 141 aa28.78■■■□□ 2.2
CNPY3-201ENST00000372836 NBPF6Q5VWK0 638 aa28.77■■■□□ 2.2
CNPY3-201ENST00000372836 NBPF4Q96M43 638 aa28.77■■■□□ 2.2
CNPY3-201ENST00000372836 MCM10Q7L590 875 aa28.77■■■□□ 2.2
CNPY3-201ENST00000372836 GNAT3A8MTJ3 354 aa28.76■■■□□ 2.19
CNPY3-201ENST00000372836 PANK1Q8TE04 598 aa28.76■■■□□ 2.19
CNPY3-201ENST00000372836 DDX17Q92841 729 aaKnown RBP28.76■■■□□ 2.19
CNPY3-201ENST00000372836 MED1Q15648 1581 aaPredicted RBP28.76■■■□□ 2.19
CNPY3-201ENST00000372836 CRB1P82279 1406 aa28.75■■■□□ 2.19
CNPY3-201ENST00000372836 ZBTB7CA1YPR0 619 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms