RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PPP6R1Q9UPN7 881 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PZPP20742 1482 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 APPP05067 770 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 IDI1Q13907 227 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 F6X3S4 739 aa11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
SMARCA1-202ENST00000371122 PDE4CQ08493 712 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 SMG6Q86US8 1419 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 H3BQV1 296 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 TRAK2O60296 914 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 REC8O95072 547 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 IGHDP01880 384 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
SMARCA1-202ENST00000371122 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 DUSP27Q5VZP5 1158 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
SMARCA1-202ENST00000371122 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 G3BP1Q13283 466 aaKnown RBP eCLIP11.11□□□□□ -0.632e-8■■□□□ 12.5
SMARCA1-202ENST00000371122 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 CLSTN1O94985 981 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 MYL6BP14649 208 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 RAPGEF4Q8WZA2 1011 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
SMARCA1-202ENST00000371122 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 SYNMO15061 1565 aa11.1□□□□□ -0.63
SMARCA1-202ENST00000371122 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 PTPRTO14522 1441 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 CDC45O75419 566 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 ANXA1P04083 346 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 RASSF8Q8NHQ8 419 aa11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-202ENST00000371122 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 RAD21O60216 631 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NPATQ14207 1427 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 FIBPO43427 364 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 ATP2B1P20020 1258 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 STK3Q13188 491 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NOS1P29475 1434 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 NRDCO43847 1150 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
SMARCA1-202ENST00000371122 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 FYB1O15117 783 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 TRPM2O94759 1503 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 IFT172Q9UG01 1749 aa11.07□□□□□ -0.64
SMARCA1-202ENST00000371122 WASHC4Q2M389 1173 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 TRIM27P14373 513 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
SMARCA1-202ENST00000371122 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 FSD1Q9BTV5 496 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 BECN2A8MW95 431 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 FOXO3O43524 673 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 PTPRMP28827 1452 aa11.05□□□□□ -0.64
SMARCA1-202ENST00000371122 DTNBO60941 627 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms