RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CAMSAP1Q5T5Y3 1602 aa8.88□□□□□ -0.99
VTA1-202ENST00000367630 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
VTA1-202ENST00000367630 KCNJ4P48050 445 aa8.88□□□□□ -0.99
VTA1-202ENST00000367630 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
VTA1-202ENST00000367630 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
VTA1-202ENST00000367630 HS1BP3Q53T59 392 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 TBC1D32Q96NH3 1257 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 ANAPC15P60006 121 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 TWISTNBQ3B726 338 aaPredicted RBP8.87□□□□□ -0.99
VTA1-202ENST00000367630 NGDNQ8NEJ9 315 aaKnown RBP8.87□□□□□ -0.99
VTA1-202ENST00000367630 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
VTA1-202ENST00000367630 QRICH2Q9H0J4 1663 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 MINK1Q8N4C8 1332 aaPredicted RBP8.87□□□□□ -0.99
VTA1-202ENST00000367630 PLIN1O60240 522 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 ZNF521Q96K83 1311 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 GNAI2P04899 355 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 AGLP35573 1532 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 ADGRF5Q8IZF2 1346 aa8.87□□□□□ -0.99
VTA1-202ENST00000367630 KIAA0232Q92628 1395 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 TICAM2Q86XR7 235 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 MSH6P52701 1360 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 EXOSC9Q06265 439 aaKnown RBP8.86□□□□□ -0.99
VTA1-202ENST00000367630 NEXNQ0ZGT2 675 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 KCNH5Q8NCM2 988 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 CCP110O43303 1012 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 CAVIN2O95810 425 aa8.86□□□□□ -0.99
VTA1-202ENST00000367630 HMGN5P82970 282 aaKnown RBP8.86□□□□□ -0.99
VTA1-202ENST00000367630 ARHGEF10O15013 1369 aa8.85□□□□□ -0.99
VTA1-202ENST00000367630 SSH2Q76I76 1423 aa8.85□□□□□ -0.99
VTA1-202ENST00000367630 CDK12Q9NYV4 1490 aaPredicted RBP8.85□□□□□ -0.99
VTA1-202ENST00000367630 WDR33Q9C0J8 1336 aaKnown RBP8.85□□□□□ -0.99
VTA1-202ENST00000367630 DDX49Q9Y6V7 483 aaKnown RBP8.85□□□□□ -0.99
VTA1-202ENST00000367630 TNRQ92752 1358 aa8.84□□□□□ -0.99
VTA1-202ENST00000367630 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
VTA1-202ENST00000367630 PRKAR2BP31323 418 aa8.84□□□□□ -0.99
VTA1-202ENST00000367630 PLEKHO1Q53GL0 409 aaPredicted RBP8.84□□□□□ -0.99
VTA1-202ENST00000367630 PANK1Q8TE04 598 aa8.84□□□□□ -0.99
VTA1-202ENST00000367630 NOB1Q9ULX3 412 aaKnown RBP8.84□□□□□ -0.99
VTA1-202ENST00000367630 NUCB1Q02818 461 aa8.84□□□□□ -0.99
VTA1-202ENST00000367630 KRT32Q14532 448 aa8.84□□□□□ -1
VTA1-202ENST00000367630 UVSSAQ2YD98 709 aa8.84□□□□□ -1
VTA1-202ENST00000367630 TRAK2O60296 914 aa8.83□□□□□ -1
VTA1-202ENST00000367630 HOXB7P09629 217 aa8.83□□□□□ -1
VTA1-202ENST00000367630 MCM4P33991 863 aa8.83□□□□□ -1
VTA1-202ENST00000367630 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
VTA1-202ENST00000367630 CABP2Q9NPB3 220 aa8.83□□□□□ -1
VTA1-202ENST00000367630 NLRP1Q9C000 1473 aa8.83□□□□□ -1
VTA1-202ENST00000367630 DIAPH3Q9NSV4 1193 aa8.83□□□□□ -1
VTA1-202ENST00000367630 HOOK1Q9UJC3 728 aaKnown RBP8.83□□□□□ -1
VTA1-202ENST00000367630 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
VTA1-202ENST00000367630 SMC5Q8IY18 1101 aa8.83□□□□□ -1
VTA1-202ENST00000367630 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
VTA1-202ENST00000367630 PSME1Q06323 249 aa8.83□□□□□ -1
VTA1-202ENST00000367630 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
VTA1-202ENST00000367630 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
VTA1-202ENST00000367630 SLC12A5Q9H2X9 1139 aa8.82□□□□□ -1
VTA1-202ENST00000367630 C14orf37Q86TY3 774 aa8.82□□□□□ -1
VTA1-202ENST00000367630 NOL10Q9BSC4 688 aaKnown RBP8.82□□□□□ -1
VTA1-202ENST00000367630 SH2B1Q9NRF2 756 aaPredicted RBP8.82□□□□□ -1
VTA1-202ENST00000367630 MROH1Q8NDA8 1641 aa8.82□□□□□ -1
VTA1-202ENST00000367630 FGD1P98174 961 aa8.82□□□□□ -1
VTA1-202ENST00000367630 FAM69CQ0P6D2 419 aa8.82□□□□□ -1
VTA1-202ENST00000367630 PIK3R4Q99570 1358 aa8.81□□□□□ -1
VTA1-202ENST00000367630 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
VTA1-202ENST00000367630 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
VTA1-202ENST00000367630 TEFQ10587 303 aa8.81□□□□□ -1
VTA1-202ENST00000367630 ADGRL3Q9HAR2 1447 aa8.81□□□□□ -1
VTA1-202ENST00000367630 RRP7AQ9Y3A4 280 aaKnown RBP8.81□□□□□ -1
VTA1-202ENST00000367630 RBM25P49756 843 aaKnown RBP8.81□□□□□ -1
VTA1-202ENST00000367630 CPLX2Q6PUV4 134 aaKnown RBP8.81□□□□□ -1
VTA1-202ENST00000367630 TERF1P54274 439 aa8.8□□□□□ -1
VTA1-202ENST00000367630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
VTA1-202ENST00000367630 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
VTA1-202ENST00000367630 MSH5O43196 834 aa8.8□□□□□ -1
VTA1-202ENST00000367630 TUBB4AP04350 444 aa8.8□□□□□ -1
VTA1-202ENST00000367630 BCAR3O75815 825 aa8.8□□□□□ -1
VTA1-202ENST00000367630 C8orf34Q49A92 452 aa8.8□□□□□ -1
VTA1-202ENST00000367630 NAT10Q9H0A0 1025 aaKnown RBP8.8□□□□□ -1
VTA1-202ENST00000367630 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
VTA1-202ENST00000367630 PPRC1Q5VV67 1664 aaKnown RBP8.8□□□□□ -1
VTA1-202ENST00000367630 PPLO60437 1756 aa8.8□□□□□ -1
VTA1-202ENST00000367630 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
VTA1-202ENST00000367630 KIF2AO00139 706 aaPredicted RBP8.79□□□□□ -1
VTA1-202ENST00000367630 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
VTA1-202ENST00000367630 DIP2AQ14689 1571 aa8.79□□□□□ -1
VTA1-202ENST00000367630 FLT4P35916 1363 aa8.79□□□□□ -1
VTA1-202ENST00000367630 A0A1W2PP64 1363 aa8.79□□□□□ -1
VTA1-202ENST00000367630 IBTKQ9P2D0 1353 aaPredicted RBP8.79□□□□□ -1
VTA1-202ENST00000367630 RAD50Q92878 1312 aa8.79□□□□□ -1
VTA1-202ENST00000367630 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -14e-7■■□□□ 14.2
VTA1-202ENST00000367630 SAFB2Q14151 953 aaKnown RBP eCLIP8.79□□□□□ -1
VTA1-202ENST00000367630 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
VTA1-202ENST00000367630 NASPP49321 788 aaPredicted RBP8.78□□□□□ -1
VTA1-202ENST00000367630 DHX16O60231 1041 aaKnown RBP8.78□□□□□ -1
VTA1-202ENST00000367630 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms