RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
MRPL55-211ENST00000366738 ZBTB7CA1YPR0 619 aa11.7□□□□□ -0.54
MRPL55-211ENST00000366738 PLSCR1O15162 318 aa11.7□□□□□ -0.54
MRPL55-211ENST00000366738 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
MRPL55-211ENST00000366738 PROM2Q8N271 834 aa11.7□□□□□ -0.54
MRPL55-211ENST00000366738 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-211ENST00000366738 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
MRPL55-211ENST00000366738 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
MRPL55-211ENST00000366738 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-211ENST00000366738 DDB1Q16531 1140 aa11.68□□□□□ -0.54
MRPL55-211ENST00000366738 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
MRPL55-211ENST00000366738 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
MRPL55-211ENST00000366738 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
MRPL55-211ENST00000366738 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
MRPL55-211ENST00000366738 GCP02774 474 aa11.67□□□□□ -0.54
MRPL55-211ENST00000366738 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
MRPL55-211ENST00000366738 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
MRPL55-211ENST00000366738 QRICH2Q9H0J4 1663 aa11.66□□□□□ -0.54
MRPL55-211ENST00000366738 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
MRPL55-211ENST00000366738 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
MRPL55-211ENST00000366738 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 TXNRD1Q16881 649 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 TOM1L2Q6ZVM7 507 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 NLRP13Q86W25 1043 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
MRPL55-211ENST00000366738 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-211ENST00000366738 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
MRPL55-211ENST00000366738 SLIT3O75094 1523 aa11.64□□□□□ -0.55
MRPL55-211ENST00000366738 COL18A1P39060 1754 aa11.64□□□□□ -0.55
MRPL55-211ENST00000366738 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
MRPL55-211ENST00000366738 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
MRPL55-211ENST00000366738 AATKQ6ZMQ8 1374 aa11.63□□□□□ -0.55
MRPL55-211ENST00000366738 BCL9O00512 1426 aa11.62□□□□□ -0.55
MRPL55-211ENST00000366738 PAPPAQ13219 1627 aa11.62□□□□□ -0.55
MRPL55-211ENST00000366738 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-211ENST00000366738 ARXQ96QS3 562 aa11.62□□□□□ -0.55
MRPL55-211ENST00000366738 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 PIK3C2AO00443 1686 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 RGPD5Q99666 1765 aa11.61□□□□□ -0.55
MRPL55-211ENST00000366738 USP6P35125 1406 aa11.6□□□□□ -0.55
MRPL55-211ENST00000366738 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
MRPL55-211ENST00000366738 NLRP6P59044 892 aa11.6□□□□□ -0.55
MRPL55-211ENST00000366738 GPR162Q16538 588 aa11.6□□□□□ -0.55
MRPL55-211ENST00000366738 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
MRPL55-211ENST00000366738 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
MRPL55-211ENST00000366738 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
MRPL55-211ENST00000366738 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
MRPL55-211ENST00000366738 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-211ENST00000366738 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
MRPL55-211ENST00000366738 ACSBG1Q96GR2 724 aa11.58□□□□□ -0.56
MRPL55-211ENST00000366738 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-211ENST00000366738 TNS2Q63HR2 1409 aa11.58□□□□□ -0.56
MRPL55-211ENST00000366738 SOX12O15370 315 aa11.57□□□□□ -0.56
MRPL55-211ENST00000366738 CSB-PGBD3P0DP91 1061 aa11.57□□□□□ -0.56
MRPL55-211ENST00000366738 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-211ENST00000366738 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
MRPL55-211ENST00000366738 BTAF1O14981 1849 aa11.56□□□□□ -0.56
MRPL55-211ENST00000366738 EXOC5O00471 708 aa11.56□□□□□ -0.56
MRPL55-211ENST00000366738 CARD10Q9BWT7 1032 aa11.56□□□□□ -0.56
MRPL55-211ENST00000366738 ABCC6O95255 1503 aa11.55□□□□□ -0.56
MRPL55-211ENST00000366738 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
MRPL55-211ENST00000366738 NLGN2Q8NFZ4 835 aa11.55□□□□□ -0.56
MRPL55-211ENST00000366738 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
MRPL55-211ENST00000366738 LRRC4BQ9NT99 713 aa11.54□□□□□ -0.56
MRPL55-211ENST00000366738 NFAT5O94916 1531 aa11.54□□□□□ -0.56
MRPL55-211ENST00000366738 TTC21BQ7Z4L5 1316 aa11.54□□□□□ -0.56
MRPL55-211ENST00000366738 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
MRPL55-211ENST00000366738 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
MRPL55-211ENST00000366738 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
MRPL55-211ENST00000366738 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.56
MRPL55-211ENST00000366738 CD163L1Q9NR16 1453 aa11.52□□□□□ -0.56
MRPL55-211ENST00000366738 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
MRPL55-211ENST00000366738 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■□□□□ 10.7
MRPL55-211ENST00000366738 POLD1P28340 1107 aa11.51□□□□□ -0.57
MRPL55-211ENST00000366738 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
MRPL55-211ENST00000366738 MON2Q7Z3U7 1717 aa11.51□□□□□ -0.57
MRPL55-211ENST00000366738 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
MRPL55-211ENST00000366738 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
MRPL55-211ENST00000366738 CARD11Q9BXL7 1154 aa11.5□□□□□ -0.57
MRPL55-211ENST00000366738 USP47Q96K76 1375 aa11.5□□□□□ -0.57
MRPL55-211ENST00000366738 KCNQ4P56696 695 aa11.49□□□□□ -0.57
MRPL55-211ENST00000366738 KCNH5Q8NCM2 988 aa11.49□□□□□ -0.57
MRPL55-211ENST00000366738 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-211ENST00000366738 KTN1Q86UP2 1357 aaKnown RBP11.49□□□□□ -0.57
MRPL55-211ENST00000366738 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
MRPL55-211ENST00000366738 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
MRPL55-211ENST00000366738 NLRP2Q9NX02 1062 aa11.48□□□□□ -0.57
MRPL55-211ENST00000366738 TTC21AQ8NDW8 1320 aa11.48□□□□□ -0.57
MRPL55-211ENST00000366738 USP54Q70EL1 1684 aa11.47□□□□□ -0.57
MRPL55-211ENST00000366738 ERBB3P21860 1342 aa11.47□□□□□ -0.57
MRPL55-211ENST00000366738 IL2RBP14784 551 aa11.47□□□□□ -0.57
MRPL55-211ENST00000366738 NME9Q86XW9 330 aa11.47□□□□□ -0.57
MRPL55-211ENST00000366738 LTN1O94822 1766 aa11.46□□□□□ -0.57
MRPL55-211ENST00000366738 USP31Q70CQ4 1352 aa11.46□□□□□ -0.57
MRPL55-211ENST00000366738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
MRPL55-211ENST00000366738 SLC12A5Q9H2X9 1139 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms