RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 NUTM2AQ8IVF1 878 aaPredicted RBP20.59■□□□□ 0.89
PCGF3-201ENST00000362003 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
PCGF3-201ENST00000362003 PRDM11Q9NQV5 511 aa20.59■□□□□ 0.89
PCGF3-201ENST00000362003 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
PCGF3-201ENST00000362003 CCDC61Q9Y6R9 512 aa20.59■□□□□ 0.89
PCGF3-201ENST00000362003 ANKRD1Q15327 319 aa20.58■□□□□ 0.89
PCGF3-201ENST00000362003 MTMR7Q9Y216 660 aa20.58■□□□□ 0.89
PCGF3-201ENST00000362003 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.89
PCGF3-201ENST00000362003 NFKBIBQ15653 356 aa20.58■□□□□ 0.89
PCGF3-201ENST00000362003 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
PCGF3-201ENST00000362003 SIL1Q9H173 461 aa20.58■□□□□ 0.89
PCGF3-201ENST00000362003 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
PCGF3-201ENST00000362003 CYP46A1Q9Y6A2 500 aa20.57■□□□□ 0.88
PCGF3-201ENST00000362003 MBD3O95983 291 aa20.57■□□□□ 0.88
PCGF3-201ENST00000362003 TNNT3P45378 269 aaPredicted RBP20.57■□□□□ 0.88
PCGF3-201ENST00000362003 CHD1LQ86WJ1 897 aa20.57■□□□□ 0.88
PCGF3-201ENST00000362003 NACAP1Q9BZK3 213 aa20.57■□□□□ 0.88
PCGF3-201ENST00000362003 RRP12Q5JTH9 1297 aaKnown RBP20.56■□□□□ 0.88
PCGF3-201ENST00000362003 KDM4AO75164 1064 aa20.56■□□□□ 0.88
PCGF3-201ENST00000362003 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
PCGF3-201ENST00000362003 SDF4Q9BRK5 362 aa20.56■□□□□ 0.88
PCGF3-201ENST00000362003 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
PCGF3-201ENST00000362003 CCDC39Q9UFE4 941 aa20.56■□□□□ 0.88
PCGF3-201ENST00000362003 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
PCGF3-201ENST00000362003 EPS15P42566 896 aa20.55■□□□□ 0.88
PCGF3-201ENST00000362003 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
PCGF3-201ENST00000362003 SLFN5Q08AF3 891 aa20.55■□□□□ 0.88
PCGF3-201ENST00000362003 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
PCGF3-201ENST00000362003 AACSQ86V21 672 aa20.54■□□□□ 0.88
PCGF3-201ENST00000362003 MRE11P49959 708 aa20.53■□□□□ 0.88
PCGF3-201ENST00000362003 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
PCGF3-201ENST00000362003 TXLNAP40222 546 aa20.53■□□□□ 0.88
PCGF3-201ENST00000362003 KINO60870 393 aaKnown RBP20.53■□□□□ 0.88
PCGF3-201ENST00000362003 XPCQ01831 940 aaPredicted RBP20.53■□□□□ 0.88
PCGF3-201ENST00000362003 IFT57Q9NWB7 429 aa20.53■□□□□ 0.88
PCGF3-201ENST00000362003 MAP4K4O95819 1239 aaPredicted RBP20.52■□□□□ 0.88
PCGF3-201ENST00000362003 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
PCGF3-201ENST00000362003 FANCAO15360 1455 aa20.52■□□□□ 0.88
PCGF3-201ENST00000362003 DENND4BO75064 1496 aaPredicted RBP20.52■□□□□ 0.88
PCGF3-201ENST00000362003 SRGAP3O43295 1099 aa20.52■□□□□ 0.87
PCGF3-201ENST00000362003 HSP90AA2PQ14568 343 aaPredicted RBP20.52■□□□□ 0.87
PCGF3-201ENST00000362003 WAPLQ7Z5K2 1190 aa20.52■□□□□ 0.87
PCGF3-201ENST00000362003 RPAP2Q8IXW5 612 aaPredicted RBP20.52■□□□□ 0.87
PCGF3-201ENST00000362003 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.87
PCGF3-201ENST00000362003 TSPY26PQ9H489 355 aa20.52■□□□□ 0.87
PCGF3-201ENST00000362003 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
PCGF3-201ENST00000362003 NAP1L1P55209 391 aaKnown RBP20.51■□□□□ 0.87
PCGF3-201ENST00000362003 SCAF11Q99590 1463 aaKnown RBP20.51■□□□□ 0.87
PCGF3-201ENST00000362003 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
PCGF3-201ENST00000362003 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
PCGF3-201ENST00000362003 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
PCGF3-201ENST00000362003 TRAK2O60296 914 aa20.5■□□□□ 0.87
PCGF3-201ENST00000362003 ITSN2Q9NZM3 1697 aa20.5■□□□□ 0.87
PCGF3-201ENST00000362003 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
PCGF3-201ENST00000362003 STK38Q15208 465 aa20.49■□□□□ 0.87
PCGF3-201ENST00000362003 K7ELQ4 463 aaPredicted RBP20.49■□□□□ 0.87
PCGF3-201ENST00000362003 PDILTQ8N807 584 aa20.49■□□□□ 0.87
PCGF3-201ENST00000362003 CAVIN1Q6NZI2 390 aaKnown RBP20.49■□□□□ 0.87
PCGF3-201ENST00000362003 TRIM22Q8IYM9 498 aa20.48■□□□□ 0.87
PCGF3-201ENST00000362003 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
PCGF3-201ENST00000362003 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
PCGF3-201ENST00000362003 JMYQ8N9B5 988 aa20.48■□□□□ 0.87
PCGF3-201ENST00000362003 NSD2O96028 1365 aa20.48■□□□□ 0.87
PCGF3-201ENST00000362003 HMGB2P26583 209 aaKnown RBP20.48■□□□□ 0.87
PCGF3-201ENST00000362003 STARD3NLO95772 234 aa20.47■□□□□ 0.87
PCGF3-201ENST00000362003 ZC3H6P61129 1189 aaKnown RBP20.47■□□□□ 0.87
PCGF3-201ENST00000362003 ALDH1L2Q3SY69 923 aa20.47■□□□□ 0.87
PCGF3-201ENST00000362003 CT47A1Q5JQC4 288 aaPredicted RBP20.47■□□□□ 0.87
PCGF3-201ENST00000362003 SETQ01105 290 aaPredicted RBP20.47■□□□□ 0.87
PCGF3-201ENST00000362003 MNS1Q8NEH6 495 aa20.47■□□□□ 0.87
PCGF3-201ENST00000362003 AMOTQ4VCS5 1084 aa20.47■□□□□ 0.87
PCGF3-201ENST00000362003 NOS1P29475 1434 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 DUSP27Q5VZP5 1158 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 CTNNA3Q9UI47 895 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 TMEM57Q8N5G2 664 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 NKTRP30414 1462 aaKnown RBP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 PIP4K2AP48426 406 aaPredicted RBP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 CEP126Q9P2H0 1117 aa20.46■□□□□ 0.87
PCGF3-201ENST00000362003 R3HCC1Q9Y3T6 440 aaKnown RBP20.46■□□□□ 0.87
PCGF3-201ENST00000362003 STK3Q13188 491 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 ATP2B1P20020 1258 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 FILIP1LQ4L180 1135 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 ARGLU1Q9NWB6 273 aaPredicted RBP20.45■□□□□ 0.86
PCGF3-201ENST00000362003 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 WASLO00401 505 aaPredicted RBP20.45■□□□□ 0.86
PCGF3-201ENST00000362003 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.86
PCGF3-201ENST00000362003 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
PCGF3-201ENST00000362003 IGHMBP2P38935 993 aaKnown RBP20.44■□□□□ 0.86
PCGF3-201ENST00000362003 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 BACH2Q9BYV9 841 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 PDRG1Q9NUG6 133 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 MCM10Q7L590 875 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 FIBPO43427 364 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
PCGF3-201ENST00000362003 CDKL5O76039 1030 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms