RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 PDCL2Q8N4E4 241 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 ME1P48163 572 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
HIPK1-202ENST00000361587 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
HIPK1-202ENST00000361587 SPC24Q8NBT2 197 aa12.52□□□□□ -0.4
HIPK1-202ENST00000361587 ZNF428Q96B54 188 aa12.52□□□□□ -0.4
HIPK1-202ENST00000361587 KIF2AO00139 706 aaPredicted RBP12.52□□□□□ -0.4
HIPK1-202ENST00000361587 WASF1Q92558 559 aa12.52□□□□□ -0.4
HIPK1-202ENST00000361587 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.4
HIPK1-202ENST00000361587 CTNNA3Q9UI47 895 aa12.52□□□□□ -0.4
HIPK1-202ENST00000361587 NOB1Q9ULX3 412 aaKnown RBP12.52□□□□□ -0.4
HIPK1-202ENST00000361587 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
HIPK1-202ENST00000361587 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
HIPK1-202ENST00000361587 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
HIPK1-202ENST00000361587 INCENPQ9NQS7 918 aa12.51□□□□□ -0.41
HIPK1-202ENST00000361587 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
HIPK1-202ENST00000361587 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
HIPK1-202ENST00000361587 DESP17661 470 aa12.51□□□□□ -0.41
HIPK1-202ENST00000361587 GBP3Q9H0R5 595 aa12.51□□□□□ -0.41
HIPK1-202ENST00000361587 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
HIPK1-202ENST00000361587 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
HIPK1-202ENST00000361587 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 SPATA32Q96LK8 384 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
HIPK1-202ENST00000361587 MVPQ14764 893 aaKnown RBP12.5□□□□□ -0.41
HIPK1-202ENST00000361587 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
HIPK1-202ENST00000361587 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
HIPK1-202ENST00000361587 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
HIPK1-202ENST00000361587 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 KIF21BO75037 1637 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 RUSC2Q8N2Y8 1516 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 UQCRHLA0A096LP55 91 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 UQCRHP07919 91 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 PAF1Q8N7H5 531 aa12.49□□□□□ -0.41
HIPK1-202ENST00000361587 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-202ENST00000361587 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
HIPK1-202ENST00000361587 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 KDM4AO75164 1064 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 GBP2P32456 591 aaPredicted RBP12.48□□□□□ -0.41
HIPK1-202ENST00000361587 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 CCDC148Q8NFR7 591 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
HIPK1-202ENST00000361587 TAF4BQ92750 862 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
HIPK1-202ENST00000361587 BRPF3Q9ULD4 1205 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 PRDM2Q13029 1718 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
HIPK1-202ENST00000361587 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 IGF1RP08069 1367 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
HIPK1-202ENST00000361587 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
HIPK1-202ENST00000361587 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
HIPK1-202ENST00000361587 EPB41L2O43491 1005 aaKnown RBP12.46□□□□□ -0.41
HIPK1-202ENST00000361587 MCM3P25205 808 aa12.46□□□□□ -0.41
HIPK1-202ENST00000361587 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.41
HIPK1-202ENST00000361587 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.41
HIPK1-202ENST00000361587 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
HIPK1-202ENST00000361587 STK3Q13188 491 aa12.46□□□□□ -0.42
HIPK1-202ENST00000361587 ZNF397Q8NF99 534 aaPredicted RBP12.46□□□□□ -0.42
HIPK1-202ENST00000361587 PLEKHH1Q9ULM0 1364 aa12.46□□□□□ -0.42
HIPK1-202ENST00000361587 OSCARQ8IYS5 282 aa12.46□□□□□ -0.42
HIPK1-202ENST00000361587 MCM4P33991 863 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 PLCD4Q9BRC7 762 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 MAP3K11Q16584 847 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 HMGB2P26583 209 aaKnown RBP12.45□□□□□ -0.42
HIPK1-202ENST00000361587 ZSCAN12O43309 604 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
HIPK1-202ENST00000361587 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
HIPK1-202ENST00000361587 ESPNB1AK53 854 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 CABP4P57796 275 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 CETN2P41208 172 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 MAP9Q49MG5 647 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 AACSQ86V21 672 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 UBXN4Q92575 508 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
HIPK1-202ENST00000361587 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
HIPK1-202ENST00000361587 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
HIPK1-202ENST00000361587 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms