RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 TRIM27P14373 513 aa7.96□□□□□ -1.13
CX3CR1-201ENST00000358309 PHAXQ9H814 394 aaKnown RBP7.96□□□□□ -1.13
CX3CR1-201ENST00000358309 VWDEQ8N2E2 1590 aa7.96□□□□□ -1.13
CX3CR1-201ENST00000358309 ZBTB47Q9UFB7 747 aaPredicted RBP7.96□□□□□ -1.14
CX3CR1-201ENST00000358309 DIP2BQ9P265 1576 aa7.96□□□□□ -1.14
CX3CR1-201ENST00000358309 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
CX3CR1-201ENST00000358309 MYH16Q9H6N6 1097 aa7.96□□□□□ -1.14
CX3CR1-201ENST00000358309 IL1RAPL2Q9NP60 686 aa7.96□□□□□ -1.14
CX3CR1-201ENST00000358309 EFCAB6Q5THR3 1501 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 RNF17Q9BXT8 1623 aaKnown RBP7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 ATP5J2-PTCD1G3V325 749 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 MSH5O43196 834 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 EXOC6BQ9Y2D4 811 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 ANKRD36BQ8N2N9 1353 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 GLI2P10070 1586 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 DZIP1LQ8IYY4 767 aaKnown RBP7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
CX3CR1-201ENST00000358309 CLTCQ00610 1675 aaKnown RBP7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 MROH1Q8NDA8 1641 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 SEC24BO95487 1268 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 IL13P35225 146 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 C8orf37Q96NL8 207 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 LARP6Q9BRS8 491 aaKnown RBP7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 RSPH6AQ9H0K4 717 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 TRPM2O94759 1503 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 KLHDC4Q8TBB5 520 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 RAPGEF4Q8WZA2 1011 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 RTN4Q9NQC3 1192 aaKnown RBP7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 UBAP1LF5GYI3 381 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 PDE4AP27815 886 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 C1orf141Q5JVX7 400 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 ZKSCAN2Q63HK3 967 aa7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 OTUD7AQ8TE49 926 aaPredicted RBP7.94□□□□□ -1.14
CX3CR1-201ENST00000358309 MADDQ8WXG6 1647 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 NEURL4Q96JN8 1562 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 HOXC9P31274 260 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 ANP32AP39687 249 aaKnown RBP7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 NFE2L2Q16236 605 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 BICDL1Q6ZP65 573 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 NDUFB9Q9Y6M9 179 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 MROH2AA6NES4 1674 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 TET3O43151 1660 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 SYNMO15061 1565 aa7.93□□□□□ -1.14
CX3CR1-201ENST00000358309 LAMC1P11047 1609 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 SPHKAPQ2M3C7 1700 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 RICTORQ6R327 1708 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 LRPPRCP42704 1394 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 ASXL1Q8IXJ9 1541 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 KDM4AO75164 1064 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 STK11IPQ8N1F8 1099 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 MEIS3Q99687 375 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 PROSER3Q2NL68 480 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 ZNF692Q9BU19 519 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 BTG4Q9NY30 223 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 PDZRN3Q9UPQ7 1066 aa7.92□□□□□ -1.14
CX3CR1-201ENST00000358309 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 GPTP24298 496 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 CWF19L2Q2TBE0 894 aaKnown RBP7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 ZBTB3Q9H5J0 574 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 SLAIN2Q9P270 581 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 FAM161AQ3B820 660 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 IL17REQ8NFR9 667 aa7.91□□□□□ -1.14
CX3CR1-201ENST00000358309 STK31Q9BXU1 1019 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 C19orf44Q9H6X5 657 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 CHPF2Q9P2E5 772 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 SIGLEC1Q9BZZ2 1709 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 PTPRMP28827 1452 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 RILPL2Q969X0 211 aa7.9□□□□□ -1.14
CX3CR1-201ENST00000358309 TRPM1Q7Z4N2 1603 aa7.9□□□□□ -1.15
CX3CR1-201ENST00000358309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 NPHP1O15259 732 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 FCHSD2O94868 740 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 PLEKHF1Q96S99 279 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 TULP4Q9NRJ4 1543 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 ATF7IPQ6VMQ6 1270 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 NUTM1Q86Y26 1132 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 PA2G4Q9UQ80 394 aaKnown RBP7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 SMG6Q86US8 1419 aaKnown RBP7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 CPS1P31327 1500 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 LMTK2Q8IWU2 1503 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 IFT172Q9UG01 1749 aa7.89□□□□□ -1.15
CX3CR1-201ENST00000358309 TAF7Q15545 349 aaPredicted RBP7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 MYO5BQ9ULV0 1848 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 PIK3C2BO00750 1634 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 PI4KAP2A4QPH2 592 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 VAMP4O75379 141 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 PI4KAP1Q8N8J0 262 aa7.88□□□□□ -1.15
CX3CR1-201ENST00000358309 ALKQ9UM73 1620 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms