RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 LMTK2Q8IWU2 1503 aa12.27□□□□□ -0.44
RNF40-202ENST00000357890 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.44
RNF40-202ENST00000357890 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
RNF40-202ENST00000357890 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
RNF40-202ENST00000357890 ERBB4Q15303 1308 aa12.27□□□□□ -0.45
RNF40-202ENST00000357890 TSPOAP1O95153 1857 aa12.27□□□□□ -0.45
RNF40-202ENST00000357890 ADGRB3O60242 1522 aa12.27□□□□□ -0.45
RNF40-202ENST00000357890 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
RNF40-202ENST00000357890 IL16Q14005 1332 aa12.26□□□□□ -0.45
RNF40-202ENST00000357890 IGSF3O75054 1194 aa12.26□□□□□ -0.45
RNF40-202ENST00000357890 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
RNF40-202ENST00000357890 PPRC1Q5VV67 1664 aaKnown RBP12.26□□□□□ -0.45
RNF40-202ENST00000357890 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
RNF40-202ENST00000357890 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
RNF40-202ENST00000357890 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
RNF40-202ENST00000357890 USP19O94966 1318 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 FBLN1P23142 703 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 CHD1LQ86WJ1 897 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
RNF40-202ENST00000357890 GNAI1P63096 354 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 COG3Q96JB2 828 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 SSFA2P28290 1259 aa12.25□□□□□ -0.45
RNF40-202ENST00000357890 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
RNF40-202ENST00000357890 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
RNF40-202ENST00000357890 MYOM1P52179 1685 aa12.24□□□□□ -0.45
RNF40-202ENST00000357890 ZNF428Q96B54 188 aa12.24□□□□□ -0.45
RNF40-202ENST00000357890 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
RNF40-202ENST00000357890 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
RNF40-202ENST00000357890 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 GAS2L3Q86XJ1 694 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 ABCC3O15438 1527 aa12.23□□□□□ -0.45
RNF40-202ENST00000357890 KIDINS220Q9ULH0 1771 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 NUTM2FA1L443 756 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 NFE2L2Q16236 605 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
RNF40-202ENST00000357890 OFD1O75665 1012 aa12.21□□□□□ -0.45
RNF40-202ENST00000357890 DRC7Q8IY82 874 aa12.21□□□□□ -0.45
RNF40-202ENST00000357890 FSD2A1L4K1 749 aa12.21□□□□□ -0.45
RNF40-202ENST00000357890 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.46
RNF40-202ENST00000357890 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.46
RNF40-202ENST00000357890 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.2□□□□□ -0.46
RNF40-202ENST00000357890 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
RNF40-202ENST00000357890 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
RNF40-202ENST00000357890 TSC1Q92574 1164 aa12.2□□□□□ -0.46
RNF40-202ENST00000357890 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
RNF40-202ENST00000357890 CCDC39Q9UFE4 941 aa12.2□□□□□ -0.46
RNF40-202ENST00000357890 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
RNF40-202ENST00000357890 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
RNF40-202ENST00000357890 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
RNF40-202ENST00000357890 CGNQ9P2M7 1197 aaKnown RBP12.19□□□□□ -0.46
RNF40-202ENST00000357890 SYCE3A1L190 88 aa12.19□□□□□ -0.46
RNF40-202ENST00000357890 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
RNF40-202ENST00000357890 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 TXNDC2Q86VQ3 553 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 POLKQ9UBT6 870 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 CDC45O75419 566 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 ANTXR1Q9H6X2 564 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
RNF40-202ENST00000357890 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
RNF40-202ENST00000357890 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 ST18O60284 1047 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 NUCB1Q02818 461 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
RNF40-202ENST00000357890 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 SASS6Q6UVJ0 657 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 NME9Q86XW9 330 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
RNF40-202ENST00000357890 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 VGLL3A8MV65 326 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 TNNT3P45378 269 aaPredicted RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
RNF40-202ENST00000357890 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 SYAP1Q96A49 352 aaPredicted RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
RNF40-202ENST00000357890 RRS1Q15050 365 aaKnown RBP12.15□□□□□ -0.46
RNF40-202ENST00000357890 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
RNF40-202ENST00000357890 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
RNF40-202ENST00000357890 DIP2CQ9Y2E4 1556 aa12.15□□□□□ -0.47
RNF40-202ENST00000357890 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.47
RNF40-202ENST00000357890 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
RNF40-202ENST00000357890 NUCB2P80303 420 aa12.14□□□□□ -0.47
RNF40-202ENST00000357890 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms