RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CCDC183Q5T5S1 534 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 SPHKAPQ2M3C7 1700 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 ATP10AO60312 1499 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 IVLP07476 585 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 MCM3P25205 808 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 ARHGAP45Q92619 1136 aa7.87□□□□□ -1.15
TRIM38-201ENST00000357085 PREX2Q70Z35 1606 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 SSH2Q76I76 1423 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 GOLGA6L9A6NEM1 432 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 BCORL1Q5H9F3 1711 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 RGL3Q3MIN7 710 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 KIF24Q5T7B8 1368 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 HSP90AB4PQ58FF6 505 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 JAKMIP3Q5VZ66 844 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 AK9Q5TCS8 1911 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 ANAPC15P60006 121 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 LEKR1Q6ZMV7 388 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 HIP1O00291 1037 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 IQCEQ6IPM2 695 aa7.86□□□□□ -1.15
TRIM38-201ENST00000357085 U2SURPO15042 1029 aaKnown RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 GPATCH8Q9UKJ3 1502 aaKnown RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 RPGRIP1LQ68CZ1 1315 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 SPDYE4A6NLX3 237 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 TET3O43151 1660 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 MNS1Q8NEH6 495 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 FOXD4L5Q5VV16 416 aaPredicted RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 FOXD4L4Q8WXT5 416 aaPredicted RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 DEF6Q9H4E7 631 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 GSDMDP57764 484 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 PLCD3Q8N3E9 789 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 ANKRD36BQ8N2N9 1353 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 WDR7Q9Y4E6 1490 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 APAF1O14727 1248 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 ZKSCAN1P17029 563 aaPredicted RBP7.85□□□□□ -1.15
TRIM38-201ENST00000357085 ABCA9Q8IUA7 1624 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
TRIM38-201ENST00000357085 VGFO15240 615 aaPredicted RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 IQGAP1P46940 1657 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 ERBB4Q15303 1308 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 PES1O00541 588 aaKnown RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 ELP1O95163 1332 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 VGLL3A8MV65 326 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 ANKRD1Q15327 319 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 TPD52L1Q16890 204 aaPredicted RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 LRSAM1Q6UWE0 723 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 ANTXR1Q9H6X2 564 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 SAMD9LQ8IVG5 1584 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 BCAR3O75815 825 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 BAG4O95429 457 aaKnown RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 ZSCAN31Q96LW9 406 aaPredicted RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 NOL10Q9BSC4 688 aaKnown RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
TRIM38-201ENST00000357085 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
TRIM38-201ENST00000357085 SSFA2P28290 1259 aa7.84□□□□□ -1.16
TRIM38-201ENST00000357085 NOLC1Q14978 699 aaKnown RBP eCLIP7.84□□□□□ -1.16
TRIM38-201ENST00000357085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.84□□□□□ -1.16
TRIM38-201ENST00000357085 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.16
TRIM38-201ENST00000357085 GBP3Q9H0R5 595 aa7.84□□□□□ -1.16
TRIM38-201ENST00000357085 LRRFIP1Q32MZ4 808 aaKnown RBP7.83□□□□□ -1.16
TRIM38-201ENST00000357085 INTS4Q96HW7 963 aaKnown RBP7.83□□□□□ -1.16
TRIM38-201ENST00000357085 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 NUP153P49790 1475 aaKnown RBP7.83□□□□□ -1.16
TRIM38-201ENST00000357085 ATF7IPQ6VMQ6 1270 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 PRDM4Q9UKN5 801 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 PSMA5P28066 241 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 MYOM2P54296 1465 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 A6NNZ2 444 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 TACO1Q9BSH4 297 aaKnown RBP7.83□□□□□ -1.16
TRIM38-201ENST00000357085 MYO1BO43795 1136 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 ANKRD45Q5TZF3 282 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 BECN2A8MW95 431 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.83□□□□□ -1.165e-6■■■■□ 19.5
TRIM38-201ENST00000357085 STK31Q9BXU1 1019 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 TRPM2O94759 1503 aa7.83□□□□□ -1.16
TRIM38-201ENST00000357085 ERC2O15083 957 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 CTAGE5O15320 804 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 SCAND2PQ9GZW5 306 aaPredicted RBP7.82□□□□□ -1.16
TRIM38-201ENST00000357085 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
TRIM38-201ENST00000357085 SMTNL1A8MU46 457 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 GRIN2AQ12879 1464 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 CDR1P51861 262 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 FRMPD1Q5SYB0 1578 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 CLEC17AQ6ZS10 378 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 POLR3GO15318 223 aaPredicted RBP7.82□□□□□ -1.16
TRIM38-201ENST00000357085 CHD1LQ86WJ1 897 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 RIPK4P57078 832 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 BCL2L13Q9BXK5 485 aa7.82□□□□□ -1.16
TRIM38-201ENST00000357085 CBFA2T2O43439 604 aa7.81□□□□□ -1.16
TRIM38-201ENST00000357085 TDRD9Q8NDG6 1382 aaKnown RBP7.81□□□□□ -1.16
TRIM38-201ENST00000357085 ABCC10Q5T3U5 1492 aa7.81□□□□□ -1.16
TRIM38-201ENST00000357085 CLGNO14967 610 aa7.81□□□□□ -1.16
TRIM38-201ENST00000357085 GTF2A1P52655 376 aaPredicted RBP7.81□□□□□ -1.16
TRIM38-201ENST00000357085 KIF18AQ8NI77 898 aa7.81□□□□□ -1.16
TRIM38-201ENST00000357085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRIM38-201ENST00000357085 CCDC73Q6ZRK6 1079 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms