RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 USP6P35125 1406 aa22.99■■□□□ 1.27
COPE-202ENST00000349893 AKAP12Q02952 1782 aa22.97■■□□□ 1.27
COPE-202ENST00000349893 CDCA7Q9BWT1 371 aaPredicted RBP22.97■■□□□ 1.27
COPE-202ENST00000349893 MARCH10Q8NA82 808 aaPredicted RBP22.96■■□□□ 1.27
COPE-202ENST00000349893 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
COPE-202ENST00000349893 WDR17Q8IZU2 1322 aa22.96■■□□□ 1.27
COPE-202ENST00000349893 PIK3C2AO00443 1686 aa22.95■■□□□ 1.26
COPE-202ENST00000349893 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
COPE-202ENST00000349893 TOM1L2Q6ZVM7 507 aa22.94■■□□□ 1.26
COPE-202ENST00000349893 NLRP6P59044 892 aa22.93■■□□□ 1.26
COPE-202ENST00000349893 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
COPE-202ENST00000349893 CPSF1Q10570 1443 aaKnown RBP22.92■■□□□ 1.26
COPE-202ENST00000349893 SGIP1Q9BQI5 828 aa22.92■■□□□ 1.26
COPE-202ENST00000349893 AXIN2Q9Y2T1 843 aa22.92■■□□□ 1.26
COPE-202ENST00000349893 CENPJQ9HC77 1338 aaPredicted RBP22.91■■□□□ 1.26
COPE-202ENST00000349893 TXNRD1Q16881 649 aa22.91■■□□□ 1.26
COPE-202ENST00000349893 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
COPE-202ENST00000349893 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
COPE-202ENST00000349893 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
COPE-202ENST00000349893 CHD4Q14839 1912 aa22.9■■□□□ 1.26
COPE-202ENST00000349893 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
COPE-202ENST00000349893 SYT17Q9BSW7 474 aa22.9■■□□□ 1.26
COPE-202ENST00000349893 STK32BQ9NY57 414 aa22.89■■□□□ 1.25
COPE-202ENST00000349893 CABP1Q9NZU7 370 aa22.89■■□□□ 1.25
COPE-202ENST00000349893 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
COPE-202ENST00000349893 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
COPE-202ENST00000349893 FHDC1Q9C0D6 1143 aaPredicted RBP22.88■■□□□ 1.25
COPE-202ENST00000349893 MTFR1LQ9H019 292 aa22.88■■□□□ 1.25
COPE-202ENST00000349893 ATF5Q9Y2D1 282 aaPredicted RBP22.88■■□□□ 1.25
COPE-202ENST00000349893 TRPM1Q7Z4N2 1603 aa22.88■■□□□ 1.25
COPE-202ENST00000349893 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
COPE-202ENST00000349893 MAP3K5Q99683 1374 aa22.87■■□□□ 1.25
COPE-202ENST00000349893 ABCC6O95255 1503 aa22.87■■□□□ 1.25
COPE-202ENST00000349893 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
COPE-202ENST00000349893 PAPPAQ13219 1627 aa22.86■■□□□ 1.25
COPE-202ENST00000349893 NHSQ6T4R5 1651 aa22.86■■□□□ 1.25
COPE-202ENST00000349893 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
COPE-202ENST00000349893 NFAT5O94916 1531 aa22.83■■□□□ 1.25
COPE-202ENST00000349893 KCNH5Q8NCM2 988 aa22.83■■□□□ 1.25
COPE-202ENST00000349893 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
COPE-202ENST00000349893 EXOC5O00471 708 aa22.82■■□□□ 1.24
COPE-202ENST00000349893 GOLGB1Q14789 3259 aaKnown RBP22.82■■□□□ 1.24
COPE-202ENST00000349893 C1QTNF8P60827 252 aa22.8■■□□□ 1.24
COPE-202ENST00000349893 TTC21BQ7Z4L5 1316 aa22.8■■□□□ 1.24
COPE-202ENST00000349893 ARXQ96QS3 562 aa22.78■■□□□ 1.24
COPE-202ENST00000349893 ZNF692Q9BU19 519 aaPredicted RBP22.78■■□□□ 1.24
COPE-202ENST00000349893 TTC21AQ8NDW8 1320 aa22.78■■□□□ 1.24
COPE-202ENST00000349893 CEP350Q5VT06 3117 aa22.77■■□□□ 1.24
COPE-202ENST00000349893 SENP3-EIF4A1A0A087X0R7 540 aa22.76■■□□□ 1.23
COPE-202ENST00000349893 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
COPE-202ENST00000349893 COL24A1Q17RW2 1714 aa22.76■■□□□ 1.23
COPE-202ENST00000349893 EVC2Q86UK5 1308 aa22.76■■□□□ 1.23
COPE-202ENST00000349893 USP54Q70EL1 1684 aa22.74■■□□□ 1.23
COPE-202ENST00000349893 BTAF1O14981 1849 aa22.74■■□□□ 1.23
COPE-202ENST00000349893 QSER1Q2KHR3 1735 aa22.74■■□□□ 1.23
COPE-202ENST00000349893 ZNF827Q17R98 1081 aa22.71■■□□□ 1.23
COPE-202ENST00000349893 ERBB3P21860 1342 aa22.71■■□□□ 1.23
COPE-202ENST00000349893 MON2Q7Z3U7 1717 aa22.7■■□□□ 1.22
COPE-202ENST00000349893 USP31Q70CQ4 1352 aa22.69■■□□□ 1.22
COPE-202ENST00000349893 ACSBG1Q96GR2 724 aa22.69■■□□□ 1.22
COPE-202ENST00000349893 SOX12O15370 315 aa22.68■■□□□ 1.22
COPE-202ENST00000349893 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
COPE-202ENST00000349893 LRRC4BQ9NT99 713 aa22.68■■□□□ 1.22
COPE-202ENST00000349893 AKT1S1Q96B36 256 aa22.67■■□□□ 1.22
COPE-202ENST00000349893 KTN1Q86UP2 1357 aaKnown RBP22.66■■□□□ 1.22
COPE-202ENST00000349893 IL2RBP14784 551 aa22.66■■□□□ 1.22
COPE-202ENST00000349893 LTN1O94822 1766 aa22.64■■□□□ 1.22
COPE-202ENST00000349893 GPR162Q16538 588 aa22.64■■□□□ 1.21
COPE-202ENST00000349893 SHANK3Q9BYB0 1731 aa22.63■■□□□ 1.21
COPE-202ENST00000349893 SLC27A3Q5K4L6 730 aa22.63■■□□□ 1.21
COPE-202ENST00000349893 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
COPE-202ENST00000349893 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
COPE-202ENST00000349893 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
COPE-202ENST00000349893 TUBGCP6Q96RT7 1819 aa22.61■■□□□ 1.21
COPE-202ENST00000349893 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
COPE-202ENST00000349893 PNPLA7Q6ZV29 1317 aa22.6■■□□□ 1.21
COPE-202ENST00000349893 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
COPE-202ENST00000349893 SBNO2Q9Y2G9 1366 aa22.6■■□□□ 1.21
COPE-202ENST00000349893 POLD1P28340 1107 aa22.59■■□□□ 1.21
COPE-202ENST00000349893 ANKRD24Q8TF21 1146 aa22.58■■□□□ 1.21
COPE-202ENST00000349893 KAT6BQ8WYB5 2073 aa22.58■■□□□ 1.2
COPE-202ENST00000349893 LY75O60449 1722 aa22.57■■□□□ 1.2
COPE-202ENST00000349893 FAM208AQ9UK61 1670 aaKnown RBP22.56■■□□□ 1.2
COPE-202ENST00000349893 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
COPE-202ENST00000349893 NME9Q86XW9 330 aa22.55■■□□□ 1.2
COPE-202ENST00000349893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
COPE-202ENST00000349893 NLGN2Q8NFZ4 835 aa22.54■■□□□ 1.2
COPE-202ENST00000349893 NSD2O96028 1365 aa22.52■■□□□ 1.2
COPE-202ENST00000349893 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
COPE-202ENST00000349893 EDC4Q6P2E9 1401 aaKnown RBP22.52■■□□□ 1.2
COPE-202ENST00000349893 TFCP2L1Q9NZI6 479 aa22.52■■□□□ 1.2
COPE-202ENST00000349893 DOT1LQ8TEK3 1739 aa22.51■■□□□ 1.19
COPE-202ENST00000349893 GRIN3BO60391 1043 aa22.5■■□□□ 1.19
COPE-202ENST00000349893 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.192e-8■□□□□ 10.7
COPE-202ENST00000349893 KLHL34Q8N239 644 aa22.5■■□□□ 1.19
COPE-202ENST00000349893 IP6K1Q92551 441 aa22.49■■□□□ 1.19
COPE-202ENST00000349893 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
COPE-202ENST00000349893 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
COPE-202ENST00000349893 KCNQ4P56696 695 aa22.47■■□□□ 1.19
COPE-202ENST00000349893 PRIM1P49642 420 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms