RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 COG3Q96JB2 828 aa19.9■□□□□ 0.78
PDE8B-204ENST00000342343 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
PDE8B-204ENST00000342343 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
PDE8B-204ENST00000342343 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
PDE8B-204ENST00000342343 ANTXR1Q9H6X2 564 aa19.89■□□□□ 0.77
PDE8B-204ENST00000342343 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
PDE8B-204ENST00000342343 HDGFP51858 240 aaKnown RBP19.88■□□□□ 0.77
PDE8B-204ENST00000342343 FAM83GA6ND36 823 aa19.87■□□□□ 0.77
PDE8B-204ENST00000342343 UBE2Q2Q8WVN8 375 aa19.87■□□□□ 0.77
PDE8B-204ENST00000342343 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
PDE8B-204ENST00000342343 DDX19BQ9UMR2 479 aa19.87■□□□□ 0.77
PDE8B-204ENST00000342343 TECPR2O15040 1411 aa19.86■□□□□ 0.77
PDE8B-204ENST00000342343 TBC1D32Q96NH3 1257 aa19.86■□□□□ 0.77
PDE8B-204ENST00000342343 ADAMTS13Q76LX8 1427 aa19.86■□□□□ 0.77
PDE8B-204ENST00000342343 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
PDE8B-204ENST00000342343 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
PDE8B-204ENST00000342343 SIRT1Q96EB6 747 aa19.85■□□□□ 0.77
PDE8B-204ENST00000342343 VAMP4O75379 141 aa19.84■□□□□ 0.77
PDE8B-204ENST00000342343 MBIPQ9NS73 344 aa19.84■□□□□ 0.77
PDE8B-204ENST00000342343 ZBTB40Q9NUA8 1239 aa19.84■□□□□ 0.77
PDE8B-204ENST00000342343 AATKQ6ZMQ8 1374 aa19.84■□□□□ 0.77
PDE8B-204ENST00000342343 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
PDE8B-204ENST00000342343 MON2Q7Z3U7 1717 aa19.83■□□□□ 0.77
PDE8B-204ENST00000342343 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.77
PDE8B-204ENST00000342343 AEBP1Q8IUX7 1158 aa19.83■□□□□ 0.77
PDE8B-204ENST00000342343 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.77
PDE8B-204ENST00000342343 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
PDE8B-204ENST00000342343 SOX12O15370 315 aa19.82■□□□□ 0.76
PDE8B-204ENST00000342343 ACEP12821 1306 aa19.82■□□□□ 0.76
PDE8B-204ENST00000342343 KIF16BQ96L93 1317 aa19.82■□□□□ 0.76
PDE8B-204ENST00000342343 ALDH1L2Q3SY69 923 aa19.82■□□□□ 0.76
PDE8B-204ENST00000342343 C3P01024 1663 aa19.81■□□□□ 0.76
PDE8B-204ENST00000342343 IPO8O15397 1037 aaKnown RBP19.81■□□□□ 0.76
PDE8B-204ENST00000342343 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
PDE8B-204ENST00000342343 ZNF692Q9BU19 519 aaPredicted RBP19.81■□□□□ 0.76
PDE8B-204ENST00000342343 AKAP12Q02952 1782 aa19.81■□□□□ 0.76
PDE8B-204ENST00000342343 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
PDE8B-204ENST00000342343 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
PDE8B-204ENST00000342343 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
PDE8B-204ENST00000342343 ZNF853P0CG23 659 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 MRPL50Q8N5N7 158 aaKnown RBP19.79■□□□□ 0.76
PDE8B-204ENST00000342343 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 GNAI1P63096 354 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
PDE8B-204ENST00000342343 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 IFT57Q9NWB7 429 aa19.79■□□□□ 0.76
PDE8B-204ENST00000342343 RRAGDQ9NQL2 400 aaPredicted RBP19.78■□□□□ 0.76
PDE8B-204ENST00000342343 SULT6B1Q6IMI4 303 aa19.78■□□□□ 0.76
PDE8B-204ENST00000342343 SMC5Q8IY18 1101 aa19.77■□□□□ 0.76
PDE8B-204ENST00000342343 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.75
PDE8B-204ENST00000342343 GOLGA6L3A6NEY3 463 aa19.76■□□□□ 0.75
PDE8B-204ENST00000342343 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
PDE8B-204ENST00000342343 PLEKHG1Q9ULL1 1385 aa19.76■□□□□ 0.75
PDE8B-204ENST00000342343 MCM4P33991 863 aa19.75■□□□□ 0.75
PDE8B-204ENST00000342343 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
PDE8B-204ENST00000342343 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
PDE8B-204ENST00000342343 AMOTL2Q9Y2J4 779 aa19.75■□□□□ 0.75
PDE8B-204ENST00000342343 ZBTB7BO15156 539 aaPredicted RBP19.74■□□□□ 0.75
PDE8B-204ENST00000342343 XRCC6P12956 609 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDE8B-204ENST00000342343 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
PDE8B-204ENST00000342343 BRPF1P55201 1214 aaPredicted RBP19.74■□□□□ 0.75
PDE8B-204ENST00000342343 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
PDE8B-204ENST00000342343 SPRYD3Q8NCJ5 442 aa19.73■□□□□ 0.75
PDE8B-204ENST00000342343 LNPKQ9C0E8 428 aa19.73■□□□□ 0.75
PDE8B-204ENST00000342343 FSD2A1L4K1 749 aa19.72■□□□□ 0.75
PDE8B-204ENST00000342343 MCM10Q7L590 875 aa19.72■□□□□ 0.75
PDE8B-204ENST00000342343 ZNF428Q96B54 188 aa19.72■□□□□ 0.75
PDE8B-204ENST00000342343 ARXQ96QS3 562 aa19.72■□□□□ 0.75
PDE8B-204ENST00000342343 USP6P35125 1406 aa19.72■□□□□ 0.75
PDE8B-204ENST00000342343 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
PDE8B-204ENST00000342343 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
PDE8B-204ENST00000342343 C22orf23Q9BZE7 217 aa19.71■□□□□ 0.75
PDE8B-204ENST00000342343 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
PDE8B-204ENST00000342343 EID1Q9Y6B2 187 aa19.71■□□□□ 0.75
PDE8B-204ENST00000342343 MFAP1P55081 439 aaKnown RBP19.7■□□□□ 0.74
PDE8B-204ENST00000342343 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
PDE8B-204ENST00000342343 GZF1Q9H116 711 aaPredicted RBP19.7■□□□□ 0.74
PDE8B-204ENST00000342343 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
PDE8B-204ENST00000342343 PEAK1Q9H792 1746 aa19.7■□□□□ 0.74
PDE8B-204ENST00000342343 NUCB1Q02818 461 aa19.69■□□□□ 0.74
PDE8B-204ENST00000342343 TOPAZ1Q8N9V7 1692 aa19.69■□□□□ 0.74
PDE8B-204ENST00000342343 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
PDE8B-204ENST00000342343 SIRT2Q8IXJ6 389 aa19.69■□□□□ 0.74
PDE8B-204ENST00000342343 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
PDE8B-204ENST00000342343 ABCC4O15439 1325 aa19.67■□□□□ 0.74
PDE8B-204ENST00000342343 FOXO3O43524 673 aa19.67■□□□□ 0.74
PDE8B-204ENST00000342343 TRAK2O60296 914 aa19.67■□□□□ 0.74
PDE8B-204ENST00000342343 CHD1LQ86WJ1 897 aa19.67■□□□□ 0.74
PDE8B-204ENST00000342343 MIS18AQ9NYP9 233 aa19.67■□□□□ 0.74
PDE8B-204ENST00000342343 PIK3R4Q99570 1358 aa19.66■□□□□ 0.74
PDE8B-204ENST00000342343 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
PDE8B-204ENST00000342343 ANKRD45Q5TZF3 282 aa19.66■□□□□ 0.74
PDE8B-204ENST00000342343 RGPD8O14715 1765 aaPredicted RBP19.66■□□□□ 0.74
PDE8B-204ENST00000342343 SSH2Q76I76 1423 aa19.65■□□□□ 0.74
PDE8B-204ENST00000342343 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
PDE8B-204ENST00000342343 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
PDE8B-204ENST00000342343 MRE11P49959 708 aa19.64■□□□□ 0.73
PDE8B-204ENST00000342343 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
PDE8B-204ENST00000342343 CLCN1P35523 988 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms